Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00133 ATGGCCCCGCCAGCACCAACTGGGATCACTGGTCTTACCATATACTTGGGAGGTGCTCAAGGGCAGGTTGTAGGTGTGGGTGTGGTTAGTGCATTGATTGCTTCAAGTCCAGTTGTGATCATGGTTGCATCATTTATGAATGCCGCTTTCAATCGTCTTCCGTTAGATGAAAATGAAATAGTTGCATCAATGCACACAATGCCTCTTGAGATGTACACTAGGGCACGTGGGAGAAACATGTCAAAAACTTAA 252 0.4563 MAPPAPTGITGLTIYLGGAQGQVVGVGVVSALIASSPVVIMVASFMNAAFNRLPLDENEIVASMHTMPLEMYTRARGRNMSKT* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00133 83 SUPERFAMILY AF0104/ALDC/Ptd012-like 7 61 - -
Pte8g00133 83 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 60 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00133 Pte-Chr8 2414477 2414814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00133 1 78 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 62.821 1.89e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00133 - - fve:101314977 81.6481