Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00106 ATGGAAAATGGTATTCTCTTCCGCACAGGAAATAATGGGGCAAACAGGACTCCTCTTAACTGGAAAACCAGGTCTGAAATAGCCCTTGGAGCTGCCCGTGGGATTGCATATATACACTCACATGGACCTACAGCCTCCCATGGAAACATCAAGTCTTCCAACATTCTCCTGACCAGAGCCTATGATGCTTGTGTTTCTGATTTTGGCTTTGCTCATCTTGCACTTCCAAGTTCAACTCCCAATCGCATCTCGGGGTACCGAGCTCCAGAAGTTACAGACCCCCAAAAAATATCCCAAAAGGCAGATGTGTACAGCTTCGGTGTAATGCTCTTGGAACTACTCACAGGAAAGCCTCCTACTCATTCCTTGCTGAGTAAGGAAGGAGTAGACCTTCCAAGATGGGTTCAATCTGTGGTTTCCGAAGAATGGAACAATGAGGTGTTTGACCTTGAGCTCCTTAGGTACCAGAGTGTTGAGGAGGAAATGGAACAGCTCCTACAGCTTGCACTTGATTGCACTGCTCAACATCCAGATACTCGTCCTTCGATGAATGTAGTGGCTACCAGAATTGAGGAGCTTTGTCATTCCAGTTCAAAGAAAGAAGATAAAGTTGAAGCCTGA 621 0.4605 MENGILFRTGNNGANRTPLNWKTRSEIALGAARGIAYIHSHGPTASHGNIKSSNILLTRAYDACVSDFGFAHLALPSSTPNRISGYRAPEVTDPQKISQKADVYSFGVMLLELLTGKPPTHSLLSKEGVDLPRWVQSVVSEEWNNEVFDLELLRYQSVEEEMEQLLQLALDCTAQHPDTRPSMNVVATRIEELCHSSSKKEDKVEA* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00106 206 Coils Coil 155 175 - -
Pte8g00106 206 SMART serkin_6 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00106 206 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 198 IPR046959 -
Pte8g00106 206 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00106 206 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 204 - -
Pte8g00106 206 Pfam Protein kinase domain 16 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00106 206 Gene3D Transferase(Phosphotransferase) domain 1 1 206 - -
Pte8g00106 206 SUPERFAMILY Protein kinase-like (PK-like) 10 188 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00106 Pte-Chr8 2119535 2121312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00106 10 200 Receptor kinase-like Gene Family AT3G17840 64.103 8.48e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte8g00106 Pkinase 7.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00106 - - qsa:O6P43_020574 318.931