Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00073 ATGAGGAAACCAAAATCAAAGCGTTTTCAGAAGTTACAAAAGTCCAATGAAGAAGAAGAAATTAAGCTGTTGGATTCATGGATCGAATCGCATAAACCCGATTCCGGCTCAAACCCAATGTCATTCGACCCGCTTCCTCGCGAAGCTAAAGTCGGACGATTAGGCGAACAATTATATTCTCGCTACGCCGGTGTAATCTATTTCAGCCAGCTTCCAATTTCAAAGAAAACCAAAGACGGGTTACGTCAGGCAAACTTCACCAAGATGACTGATATACAGAGAGCTTGCCTGCCTCACGCGCTTTGTGGACGTGACATTCTTGGTGCTGCCAAAACTGGATCCGGGAAAACTCTGGCTTTTGTGATACCTGTTCTAGAGAAGTTATATAGGGAGAGATGGGCTCCTCAATTTGGCGTTGGCAGCATTATAATATCCCCAACAAGAGAATTAGCAGGTCAATTATTTGATGTGCTTAAGGCTGTTGGCAGACATCATAGGTTTAGTGCAGGGCTCCTAATTGGAGGTCGCAAGGATGTTGACACAGAGAAGGAACATGTTAATGATCTGAACATATTGGTTTGTACTCCTGGTCGACTTCTACAGCACATGGATGAAACGCCTAATTTTGATTGTTCACAGCTTCAGCAGGTCCTAGTCCTTGATGAGGCTGATCGTATTCTTGATAAGAAATTTGAAAGGGATCTAAATGCTGTCATTTCACAACTTCCCAAGCATCGACAGACATTGCTTTTCTCTGCAACGCAAACCAAATCAGTTCAAGATCTAGCCAGATTAAGCCTAAAAGACCCTGAGTACCTAGGTGTACATGAAGAATCTGTTACAGCAACTCCCACTATGTTACAGCAAAGTGCAATGATTGTTCCTCTTAACCAAAAATTAGACATGTTATGGAGTTTCATCAGACGCCATCTTAAATCAAGAATTCTTGTGTTTCTTTCAAGCTGCAAGCAGGTAAGATTTGCTTTTGAAACTTTTAAGAAACTCAGACCTGGAATTCCATTGAAATGCCTGCATGGAAGGATGAAGCAGGAAACACGGATGGCCATATATATGCAGTTTTGTGAGATGCATTCAGTGCTGTTCTCAACTGATGTGGCAGCCAGAGGACTTGATTTTAATAAAGGAGTAGACTGGGTGGTCCAGGTAGATTGTCCTGAAAACGTTGCAGGATATATCCATAGAGTTGGTCGTACAGCTCGTTATCTTTCTGGAGGGAGGTCATTGTTGTTTCTCATGCCGTCAGAAATGAAAATGATAGAGAAGTTAAGAGCATCGAAAGTGCCGATAGAAATTATGAAGCCAAGGAAAAAATATCTAGAGCCTATTTCTGGTCTGTTGTCAGCATTGATGGTGAAGTACCCAGACATGCAGCAGCTAGCTCAAAGAGCCTTTGTTACATACTTGAAATCCATTCATATTCAGAAAGATAAAGAGATCTTTGATGTTCTGAAACTTCCTCTGGAGGAATATTCAGCATCATTGGGTTTACCAATACCTCCAAAAGTTCGCTTCCTAGGACAGAAACTCAAGGGTAAAGCAATTTTGACAAAATCTTCAAGTGAAACAGAAACTTCCTTGCAGGAAAGTTTGTTGGAGATTTCTAGAAAGGGGATGGTTGATATAAGTGATCTTAATGTGGACGAGCCAAAGGAAGGTATTCTTCAGGAAAAGCACTCTCAGGATGAGGGCAAGCAGGGAGTTTCTGAGACCGCAAATAATGTGCCGATTACCCGGGTCTCAAAAAAGAAGAAGCTCAAGATCAATGTCCACAAACCTACAGGAACCAAGGTTGTCTTTGATGATGAAGGCAATGCTCTAGATCCAAGTATGGCTGATGCACAGGACAAGAACGACTCTCTGCATCTTGATCAAGATAAAAGAAAAGAATATTATGAAAAGCTAAGGGCACAGTTGAAACAGAGGGACAAAGAAGACAAACTTCTACATCGCCAGCGTCTAAGAGAAAAAAGAATCAAGGAGAAAGAGAAGTGGAGAGGAGGAGACATGGAGAGAGAAGCTTCTGATGAAGATCTTTCTGGGTCAGAAGAAGAACCACATAGAAAGCGACCACGTGAAAATGGAAAAATATATTTTAGTGATGATGATGAATATAATGATGATGCTGAGAGAACAGAGGTCACAAACAATGCAGGCATAAATGCCAATATTTCATTGCAAGAACAGGAAGCACTGGCTCTCAAACTACTAAACTCCATGCATTCCAGTCCTTTCGAATCTGGCATCCATTGA 2271 0.4157 MRKPKSKRFQKLQKSNEEEEIKLLDSWIESHKPDSGSNPMSFDPLPREAKVGRLGEQLYSRYAGVIYFSQLPISKKTKDGLRQANFTKMTDIQRACLPHALCGRDILGAAKTGSGKTLAFVIPVLEKLYRERWAPQFGVGSIIISPTRELAGQLFDVLKAVGRHHRFSAGLLIGGRKDVDTEKEHVNDLNILVCTPGRLLQHMDETPNFDCSQLQQVLVLDEADRILDKKFERDLNAVISQLPKHRQTLLFSATQTKSVQDLARLSLKDPEYLGVHEESVTATPTMLQQSAMIVPLNQKLDMLWSFIRRHLKSRILVFLSSCKQVRFAFETFKKLRPGIPLKCLHGRMKQETRMAIYMQFCEMHSVLFSTDVAARGLDFNKGVDWVVQVDCPENVAGYIHRVGRTARYLSGGRSLLFLMPSEMKMIEKLRASKVPIEIMKPRKKYLEPISGLLSALMVKYPDMQQLAQRAFVTYLKSIHIQKDKEIFDVLKLPLEEYSASLGLPIPPKVRFLGQKLKGKAILTKSSSETETSLQESLLEISRKGMVDISDLNVDEPKEGILQEKHSQDEGKQGVSETANNVPITRVSKKKKLKINVHKPTGTKVVFDDEGNALDPSMADAQDKNDSLHLDQDKRKEYYEKLRAQLKQRDKEDKLLHRQRLREKRIKEKEKWRGGDMEREASDEDLSGSEEEPHRKRPRENGKIYFSDDDEYNDDAERTEVTNNAGINANISLQEQEALALKLLNSMHSSPFESGIH* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00073 756 MobiDBLite consensus disorder prediction 666 720 - -
Pte8g00073 756 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 295 447 IPR001650 -
Pte8g00073 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 425 IPR027417 -
Pte8g00073 756 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 66 94 IPR014014 GO:0003724
Pte8g00073 756 Pfam DEAD/DEAH box helicase 90 262 IPR011545 GO:0003676|GO:0005524
Pte8g00073 756 MobiDBLite consensus disorder prediction 603 631 - -
Pte8g00073 756 SMART ultradead3 85 289 IPR014001 -
Pte8g00073 756 Pfam Domain of unknown function (DUF4217) 453 509 IPR025313 -
Pte8g00073 756 Gene3D - 56 279 IPR027417 -
Pte8g00073 756 MobiDBLite consensus disorder prediction 563 582 - -
Pte8g00073 756 Pfam Helicase conserved C-terminal domain 299 408 IPR001650 -
Pte8g00073 756 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 219 227 IPR000629 -
Pte8g00073 756 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 273 IPR014001 -
Pte8g00073 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 273 IPR027417 -
Pte8g00073 756 PANTHER RNA HELICASE 67 569 - -
Pte8g00073 756 CDD SF2_C_DEAD 287 418 - -
Pte8g00073 756 Gene3D - 284 509 IPR027417 -
Pte8g00073 756 CDD DEADc_DDX10 77 276 - -
Pte8g00073 756 SMART DUF4217_3 448 511 IPR025313 -
Pte8g00073 756 MobiDBLite consensus disorder prediction 666 708 - -
Pte8g00073 756 SMART helicmild6 323 409 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00073 Pte-Chr8 1540450 1545132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00073 68 429 Eukaryotic Initiation Factors Gene Family AT3G19760 28.455 3.16e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00073 K14776 - cave:132176342 999.964