Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00062 ATGGGTGGTCTTTGTAGCAGAAGCAGCAATTCCGAGAGTGATTACAATGGTTACAAATCAGGTGCAGCTGATGCAGGGAGCAATCAGAAAAGCCATAGACCTGTGGCCAATCCATCTTACGCCCCAGGTCAGCAATCCAACCAAGTACCTCAGAGACCTGCTGTGCCAACACAGACAGGTCCATGGAAGCCTTTTATTCCAAGCCATAAACCTTCTCCCAACCTAGAAACCATTTTAGGTAAACCGTATGAAGATGTTAAGCAATACTACAGCCTTGGAAAAGAATTGGGTAGAGGTCAATTCGGGGTGACATACCTTTGTACTGCGAATTCAACTGGAATGCAATATGCTTGCAAGTCTATCTCGAAAAGAAAGCTGATCACCAAGAGTGATAAGGAGGATATGAGGAGAGAGATTCACATTATGCAACACATGAGTGGGCAACCCAACATTGTGGAGTTTAAAGGTGCTTATGAGGATAAGCAATCTGTTCATTTGGTGATGGAGTTATGTGCAGGTGGTGAGCTCTTTGATAGGATTATAGCCAAGGGGCATTACAGTGAAAGAGCTGCTGCTTCAATAATCAGGCAGATTGTTAATGTTGTTCATATCTGCCATTTTATGGGAGTCATGCACAGAGATCTCAAGCCTGAGAATTTCTTGCTGTCCAGCAAGGACGAGCATACCCCCCTAAAGGCAACTGATTTTGGACTGTCAGTTTTCATCGACGAAGGCAAGGTCTACCGAGATATTGTTGGGAGTGCTTACTATGTTGCTCCTGAAGTTCTAAGACGAGGATACGGAAAAGAAATAGATATATGGAGTGCTGGAGTTATGTTGTATATCTTACTGAGTGGAGTACCTCCATTTTGGGCTGAGACGGAGAAAGGAATATTTGATGCCATATTAGAAGGACATGTTGATTTTGAAAGCAAACCGTGGCCATCTATTTCAAGAAGTGCCAAGGATCTTGTACAGAAGATGCTCAATAAAGACCCAAAGAAACGGATTACTGCTGTTCAAGTCCTAGAGCATCCATGGCTCAAGGAGGGTGGAGATGCATCAGACAAACCCATTGACAGTGCTGTATTGTCTAGAATGAAGCAATTCAGAGCAATGAATAAACTCAAGCAGCTTGCATTGAAGGTTATTGCAGAAAACCTTTCGAAAGAAGAGATCCAAGGGCTGAAGGCCATGTTTGCGAACATGGACACTGACAACAGTGGCACTATCACATATGAAGAACTGAAGGCAGGATTATCTCAGCTCGGTTCAAAGCTTACAGAGGCTGAGGTCAAGCAGCTGATGGATGCTGCAGATGTTGATGGAAATGGGACAATTGACTACATTGAATTTATTACTGCTACAATGCACAGGCATAGGCTTGAAAGAGATGAGCATCTCTACAAGGCCTTCCGATATTTTGATAAGGATAACAGTGGGTTTATAACTAGAGATGAACTGGAAACAGCCATGAAAGACTATGGAATGGGTGATGATGCTACCATCAGAGAAATTATATCTGAAGTTGATACAGATAATGATGGCAGAATAAACTATGAAGAGTTCTGTGCAATGATGAGAAGTGGAACCACTCAGCCACAGGGGAGGCTATTCTAG 1620 0.4309 MGGLCSRSSNSESDYNGYKSGAADAGSNQKSHRPVANPSYAPGQQSNQVPQRPAVPTQTGPWKPFIPSHKPSPNLETILGKPYEDVKQYYSLGKELGRGQFGVTYLCTANSTGMQYACKSISKRKLITKSDKEDMRREIHIMQHMSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASIIRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEHTPLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRGYGKEIDIWSAGVMLYILLSGVPPFWAETEKGIFDAILEGHVDFESKPWPSISRSAKDLVQKMLNKDPKKRITAVQVLEHPWLKEGGDASDKPIDSAVLSRMKQFRAMNKLKQLALKVIAENLSKEEIQGLKAMFANMDTDNSGTITYEELKAGLSQLGSKLTEAEVKQLMDAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFRYFDKDNSGFITRDELETAMKDYGMGDDATIREIISEVDTDNDGRINYEEFCAMMRSGTTQPQGRLF* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00062 539 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Pte8g00062 539 FunFam Calcium-dependent protein kinase 1 92 175 - -
Pte8g00062 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Pte8g00062 539 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Pte8g00062 539 FunFam calcium-dependent protein kinase 1 176 355 - -
Pte8g00062 539 Coils Coil 413 433 - -
Pte8g00062 539 PANTHER SERINE/THREONINE-PROTEIN KINASE 85 523 - -
Pte8g00062 539 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Pte8g00062 539 ProSiteProfiles EF-hand calcium-binding domain profile. 499 533 IPR002048 GO:0005509
Pte8g00062 539 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Pte8g00062 539 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Pte8g00062 539 SMART serkin_6 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00062 539 ProSiteProfiles Protein kinase domain profile. 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00062 539 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Pte8g00062 539 CDD STKc_CAMK 90 347 - -
Pte8g00062 539 MobiDBLite consensus disorder prediction 1 74 - -
Pte8g00062 539 SUPERFAMILY EF-hand 387 527 IPR011992 -
Pte8g00062 539 Gene3D - 356 530 - -
Pte8g00062 539 Pfam EF-hand domain pair 396 456 IPR002048 GO:0005509
Pte8g00062 539 Pfam EF-hand domain pair 466 528 IPR002048 GO:0005509
Pte8g00062 539 Pfam Protein kinase domain 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00062 539 Gene3D Transferase(Phosphotransferase) domain 1 176 355 - -
Pte8g00062 539 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Pte8g00062 539 SMART efh_1 502 530 IPR002048 GO:0005509
Pte8g00062 539 SMART efh_1 467 495 IPR002048 GO:0005509
Pte8g00062 539 SMART efh_1 431 459 IPR002048 GO:0005509
Pte8g00062 539 SMART efh_1 395 423 IPR002048 GO:0005509
Pte8g00062 539 SUPERFAMILY Protein kinase-like (PK-like) 89 357 IPR011009 -
Pte8g00062 539 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Pte8g00062 539 FunFam Calcium-dependent protein kinase 1 356 531 - -
Pte8g00062 539 CDD EFh 470 528 IPR002048 GO:0005509
Pte8g00062 539 MobiDBLite consensus disorder prediction 1 55 - -
Pte8g00062 539 Gene3D Phosphorylase Kinase; domain 1 92 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00062 Pte-Chr8 1350649 1355276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00062 38 540 EF-hand Containing Proteins AT3G20410 78.585 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte8g00062 Pkinase 1.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00062 K13412 - qsu:111998297 879.396