Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00060 ATGTGCCTTCATACTGCTGTTCAGTTAGGCATACCTGACAAAGTTTCCAACCATGGCCGACCAATTACTCTCCCTGAGTTGGCCACAGCTCTTCATCTTCATCCAAACAGAACTGTAGCCCTAAACCAGCTCATGCGATTCCTAGTCTTCAAGGGTTTATTTTCCACAACCACAATCAACGAAGAGGATGCATACGTTCTAGCTCCTTCGTCCCACCTTTTCCTGAGTGACATTGAAACTACAATAAGTACTGCTATATCTTCTCCACCCTCAGTGCTCGGACTATTTGAACCCTTCCATGCCAGTATTCTAAAAGCATGGAAAAACTTGGGGAATTGGTTCCTTGGTGACGAACCAATCACACCATTTAAGTTCACACATGGTATAAGCTTTTGGGAATACATTAAGGGAACACCTGATGGACATGTTTTCCATGAAACCATGGAGATCTTCTCTAAAAATTTCAATGAATCGTCTGATTTAAAAACTTGTTTAGCAGCTTTTGAAGGGTTAGGGTCAATGGTTGATGTTGGAGGTGGAACTGGAGCTCTAGCAAAAGCTATTTCGGAGACCTATACCCTTATGGAATGCATAGTCTTGGATCTCCCACAAGTTACGGAGAACATGCCACAGCCAACACAACAGGGTAACTTACGTTATGTGGGAGGTGACATGTTTCATTGTATCCCACCTGCTGAAGCTGTACTAATGAAGTGGATTCTGCATAATTGGAGTGATGAGAAATGTCACTTGATACTGAAAAATTGTAAAGATGCCATTTCACAAAAAGGAAAACAAGGAAAAATAATCATCATTGACGATGTTCTAAATCAAGAGAATGATGGACAAGAATCAGCTGCATACAAATTCATTCTTGATGTGACGATGATGCTTCTACACGATGGAAAGGAAAGAACTGAGACAGAATGGAAGAAGTTGATCATGAATGCTGGTTTCAACCATTACAAAATAACACCATTACTAGATTTTAGGTCACTTATTGAAGTCTTCCCTTAA 1017 0.4051 MCLHTAVQLGIPDKVSNHGRPITLPELATALHLHPNRTVALNQLMRFLVFKGLFSTTTINEEDAYVLAPSSHLFLSDIETTISTAISSPPSVLGLFEPFHASILKAWKNLGNWFLGDEPITPFKFTHGISFWEYIKGTPDGHVFHETMEIFSKNFNESSDLKTCLAAFEGLGSMVDVGGGTGALAKAISETYTLMECIVLDLPQVTENMPQPTQQGNLRYVGGDMFHCIPPAEAVLMKWILHNWSDEKCHLILKNCKDAISQKGKQGKIIIIDDVLNQENDGQESAAYKFILDVTMMLLHDGKERTETEWKKLIMNAGFNHYKITPLLDFRSLIEVFP* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00060 338 PANTHER O-METHYLTRANSFERASE 1 323 IPR016461 GO:0008168
Pte8g00060 338 Gene3D - 1 74 IPR036388 -
Pte8g00060 338 Pfam Dimerisation domain 1 49 IPR012967 GO:0046983
Pte8g00060 338 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 336 IPR029063 -
Pte8g00060 338 Gene3D Vaccinia Virus protein VP39 95 338 IPR029063 -
Pte8g00060 338 Pfam O-methyltransferase domain 107 320 IPR001077 GO:0008171
Pte8g00060 338 SUPERFAMILY "Winged helix" DNA-binding domain 1 77 IPR036390 -
Pte8g00060 338 PIRSF O-mtase 1 338 IPR016461 GO:0008168
Pte8g00060 338 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 338 IPR016461 GO:0008168
Pte8g00060 338 FunFam O-methyltransferase ZRP4 88 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00060 Pte-Chr8 1335128 1337183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00060 1 325 Monolignol Biosynthesis Gene Families AT5G54160 31.871 1.49e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00060 K22588 K13262 qsu:111989180 319.316