Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00056 ATGGCTTCCAATGATGCTACTGCACAATTTGAAGGTGGATACACCGGAGAAACCAACCCAGTGGTTGGTACCAATAATGGAGATGACCATCATGGTATCGATAATGGTGGTGGAAATGTGGGAGTGACCTTGAAGAAAGGTCCATGGACTGCAGATGAGGATGCCATTCTAATTGAATATGTAGTCAATCATGGTGAAGGGAACTGGAATGCGGTGAGGAAGTCTACTGGGTTGCCTCGTTGCGGTAAGAGTTGTAGGCTCAGGTGGGTAAACCATTTGCGACCAAATTTGAAGAAAGGTGCTTTTTCTCCAGAAGAGGAACAACTCATCGTTCAGCTTCATGCCCAATATGGCAACAAGTGGGCTAAAATGGCTTCTCTGTTACCTGGACGAACAGACAATGAAATCAAGAATTACTGGAATACAAGAATCAAACGTCGTCAACGTCAAGGTCTGCCTCTGTATTCCAATGAACCTCAACAGAGATATACAACCCCACCAACCACGCCACCCTCTCTAAGATCACCCTCTTCTTTGACAGCACCAACAACTCCAACAGGTTCGACATTTCTCTTCCATACCCAACGCCATTTCCCTCTGTCTCCGTCCACACCAACTTCTCTGACAGCACCGATAACACCAACAACACCAACAGGTCCAAGTCCAAAGTTTCAGTTCCATGCTCAACATCACCATTTCCCTCTCTCACCAACTTCACATCCTCATTCTCCATTAACACCACAGCATCCAACTACACCCACATACAATTTCAATTCACCTTCTTCCACTTTCACGAGTTCCGGCTTCAATTTTCAACGGCCAACTCCTTTACTCAGTCCTACACTTCAGTTTAAGCGTTTTCGTTCGTCTCATGGGAGTTACTCTCTTTCACCTTCAACAACTTCATCAACTTGCGCTGTTTCACAGTTGAATCATCAACCTGCAACTACTCTAATGCCAAGCATTGGGGGATTTCAGTTTCCTACAAGTTCGTTAGAAATGATTAAAACCCAAGTTGATTCATCCGACCATGTCGCTAACTCGCCTACTTCAGTTCATCGTCCTTCGAATCTGGAGCTCCCTTCAAACCAATTTTCCAAATATAGACAGCCTGATCAAATTACTTTTGACACCAATACCAATGTGAATGAAAATACAACTGCTCAGATGAATCATGGAGAGATAATGGGGAGTCTTTCATCTAAATCTAAGGTATTGACTTCTGGTGAAAGTCCAGGCAAGCAGAGTCTCTTTGATTTCAAAGACGACGAAAGTTCGTTGTTTGATGAGTGCAGAGATTTAGACGAGTTTAGCTCTCTCTTCTGGTCTAATTCTACGTCAGAAATGAAAACGAAGGAAGAAACATCGGATTTCAGCAAAGCCATGCAAGATGATCTGTCTAAACTGCTTACAGGCATCCCCTCTTCCATACAGGTTTCAGATTGGTTTAGCGACTGGGAAGGTTCAAACGGACAGTCTTCTGTTCTCACCTCCGATGTTACTATAGGTGGAGATATTAGGCCTTCAAAATCCATGGCTTCTTTGGTGCCTGATGCTTCTCAAAGTAACCATAACCATCATGACAATACTTCGGCTAGCTGCCTGCACTTGGAATAA 1617 0.4385 MASNDATAQFEGGYTGETNPVVGTNNGDDHHGIDNGGGNVGVTLKKGPWTADEDAILIEYVVNHGEGNWNAVRKSTGLPRCGKSCRLRWVNHLRPNLKKGAFSPEEEQLIVQLHAQYGNKWAKMASLLPGRTDNEIKNYWNTRIKRRQRQGLPLYSNEPQQRYTTPPTTPPSLRSPSSLTAPTTPTGSTFLFHTQRHFPLSPSTPTSLTAPITPTTPTGPSPKFQFHAQHHHFPLSPTSHPHSPLTPQHPTTPTYNFNSPSSTFTSSGFNFQRPTPLLSPTLQFKRFRSSHGSYSLSPSTTSSTCAVSQLNHQPATTLMPSIGGFQFPTSSLEMIKTQVDSSDHVANSPTSVHRPSNLELPSNQFSKYRQPDQITFDTNTNVNENTTAQMNHGEIMGSLSSKSKVLTSGESPGKQSLFDFKDDESSLFDECRDLDEFSSLFWSNSTSEMKTKEETSDFSKAMQDDLSKLLTGIPSSIQVSDWFSDWEGSNGQSSVLTSDVTIGGDIRPSKSMASLVPDASQSNHNHHDNTSASCLHLE* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00056 538 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Pte8g00056 538 MobiDBLite consensus disorder prediction 147 223 - -
Pte8g00056 538 CDD SANT 48 93 IPR001005 -
Pte8g00056 538 Pfam Myb-like DNA-binding domain 99 142 IPR001005 -
Pte8g00056 538 Pfam Myb-like DNA-binding domain 46 93 IPR001005 -
Pte8g00056 538 FunFam MYB-related transcription factor 45 98 - -
Pte8g00056 538 MobiDBLite consensus disorder prediction 174 223 - -
Pte8g00056 538 MobiDBLite consensus disorder prediction 236 259 - -
Pte8g00056 538 SUPERFAMILY Homeodomain-like 44 140 IPR009057 -
Pte8g00056 538 MobiDBLite consensus disorder prediction 514 532 - -
Pte8g00056 538 ProSiteProfiles Myb-like domain profile. 41 93 IPR001005 -
Pte8g00056 538 MobiDBLite consensus disorder prediction 508 538 - -
Pte8g00056 538 MobiDBLite consensus disorder prediction 343 363 - -
Pte8g00056 538 Gene3D - 101 165 - -
Pte8g00056 538 FunFam Transcription factor GAMYB 101 147 - -
Pte8g00056 538 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 26 494 - -
Pte8g00056 538 SMART sant 98 146 IPR001005 -
Pte8g00056 538 SMART sant 45 95 IPR001005 -
Pte8g00056 538 Gene3D - 45 98 - -
Pte8g00056 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 148 IPR017930 -
Pte8g00056 538 CDD SANT 101 142 IPR001005 -
Pte8g00056 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 93 IPR017930 -
Pte8g00056 538 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00056 Pte-Chr8 1265150 1267680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00056 32 182 MYB Transcription Factor Family AT4G26930 63.924 5.41e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte8g00056 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00056 - - qsa:O6P43_021180 351.288