Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00053 ATGTTGTATTATTGTTCTTACACGATCCTGGTGTATCTCTCATTCCCCGTTCTCTCCAGCCAGCTAATTGCAGTTTCTTCAATCAGTTCACCTTCAAAAACTCAACACCGTGTGGTGTATGAAGATATTTTCAGCGACAGGTTACTGAAGGAGGATGTAGGCAATAATCATGAGATACGTTGCTCTAGAGAAAGAAGTAGAGCAGCATGGAAAATTATTGAGGAGTATTTGACACCTTTTGTGGAGAAACAAAAGTATAAAATTTCAACAAGGTGTAGGCTTCATCCTGATAATGATTTGTACAGAGATCAAGAGGTCCACAAGATACATCTGGATCTAAACGACTGGCAATGTGGATACTGTAAAAAAAGGTTCTATGAAGAAAAGTATTTGGATAAGCATTTTGATAATAGACATGCTGATTTGCTAAATGTGAACCACAGCAGGTGCTTGGCAGATGTATGTGGTGCACTACACTGTGATGTTGTCACGAATTCTGCGTCAAAAAAATCTAAATGCAATCCTGCTGCAGCTTCAAGGAATAAGCATCTCTGCGAGAGTTTAGCTGATAGTTGTTTCCCTGTAAATGAGGGACCTGCAGCAAGCTATCTTCATGAATTCTTCTTGCGCCAATTTTGTGATGCCCACAGTTGCACTGGAGGCCTGAAACCCTTCTCTAGAGGACGACAGAAACGGACCAGTATGTTCTATATCTTCATGTCAATATTAACAGTGACGCTCGTGGTATTATTTTATACCTATGTTTATGTGTTCCAAAGGGGAATGAAAAAGGGAACTCAGATACTGAAGCGTATCTCACAAAGTGGAAAGAAGAAAAAACCTATATAG 849 0.3969 MLYYCSYTILVYLSFPVLSSQLIAVSSISSPSKTQHRVVYEDIFSDRLLKEDVGNNHEIRCSRERSRAAWKIIEEYLTPFVEKQKYKISTRCRLHPDNDLYRDQEVHKIHLDLNDWQCGYCKKRFYEEKYLDKHFDNRHADLLNVNHSRCLADVCGALHCDVVTNSASKKSKCNPAAASRNKHLCESLADSCFPVNEGPAASYLHEFFLRQFCDAHSCTGGLKPFSRGRQKRTSMFYIFMSILTVTLVVLFYTYVYVFQRGMKKGTQILKRISQSGKKKKPI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00053 282 PANTHER ZINC FINGER PROTEIN-RELATED 33 280 - -
Pte8g00053 282 ProSitePatterns Zinc finger C2H2 type domain signature. 118 139 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00053 Pte-Chr8 1197193 1200186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00053 40 281 C2H2 Transcription Factor Family AT5G63280 61.475 1.96e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte8g00053 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00053 - - qsa:O6P43_021187 408.297