Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00049 ATGGAACATGCCATTCCCAGCGAATCATTCTGCAGTGACTCTAGAGATACAGATTGCTCACCAGTCATGGCCTCCAATGGAAAACGAGTGATAATAGATGAGATGGACTTCTTTTCTGACAAATGTGAATACAACAGCAATTTTAAGAGGGAGACTGAACGTCAAGAGCAGATGCTCCACACAAATGGGCTCCATACTGGTTTAGATCTTACGATGAACACTAACAGCACCAAATCAACACTGGTGGATGATGGAACTTCGCGCAACATGGAAGATAAGAGGGATACATCTGATAGGGTGGGGGCTTTGTTGTCTGAATTACACCAAATGAATGAAGAGAACCAAAGGTTGAAAGAGCTAATCAATCAGATGAACAATAAATACAGTTCCTTACATAAGCATCTCACCTTGATGATGCAGCAGCAGCGGAAGCAAATGAGTTTAGCTTCTATTAATGAAAGACATGAACATCCACAAATATCTTCCGAAGGAAATCAACAGGATTTCATTGATGAAGGAAATGATCATCATTTAGATGGAGATAAGAGTGACTACAGTAGAGAATGCAGGAGGGCGACAAGAGATGACAGACCTAACCAAGGGGTTCCTCAATTGCTCACGAACAACGTTCCTGCTAGGCTGAATACATTCAGGGATGTTGATCAAGAATCTGCAGACAACATGATTAAGAAAGCTCGTGTATCAGTAAGAGCACGATCCGAGTCACCAATGATTTCAGATGGATGTCAGTGGAGAAAATATGGGCAGAAGATGGCAAAAGGCAATCCTTGCCCTAGAGCTTACTATCGATGCACCATGGGGGCAGGTTGTCCAGTTAGGAAGCAAGTGCAAAGGTGTGCAGAAGATCAAACAATTTTGATCACTACATATGAAGGTCAACACGACCATCCACTGCCTCCAAATGCTTTAGCAATGTCATCAACAACATCAGCTGCAGCATCAATGCTCCTTTCCGGATCAATGCCAAGTGCAGATGGACCTATGAACTCCAACTTGTTCTCAAGAGCTACACTCCCATGTGCACCAAATCTTGCTACCCTCTCAGCCTCGGCACCATTTCCAACCATTACATTGGATCTCACACAAAGTAATCCCAATTCATCGTTAGAATTAATACCAAGGTCATCATCACAAGTCTTCTCTCCAAGCTTAGCACAGGATTTGATCTCATTGCCAAGCATTCTTTCTGAGGCCCTTTATAATAACCAGTCTAGGGTTTCCGGTTCTGAAACAATGGAGCCATCTTCGCCATTAGCTCCTATTCTGACGCAGTCACACTCATTCTCCGACAGTGTGAGTGCAGCAACTGCTGCCATTACTGCAGACCCCAATTTCACGTCAGCTCTGATGGCAGCAATTACTTCTGTCATTGGCAACAGTAATCAACCGAAAAGTAATGTTAATAATGATACAAGTGAAAAGCAGCAGTAG 1452 0.4325 MEHAIPSESFCSDSRDTDCSPVMASNGKRVIIDEMDFFSDKCEYNSNFKRETERQEQMLHTNGLHTGLDLTMNTNSTKSTLVDDGTSRNMEDKRDTSDRVGALLSELHQMNEENQRLKELINQMNNKYSSLHKHLTLMMQQQRKQMSLASINERHEHPQISSEGNQQDFIDEGNDHHLDGDKSDYSRECRRATRDDRPNQGVPQLLTNNVPARLNTFRDVDQESADNMIKKARVSVRARSESPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMGAGCPVRKQVQRCAEDQTILITTYEGQHDHPLPPNALAMSSTTSAAASMLLSGSMPSADGPMNSNLFSRATLPCAPNLATLSASAPFPTITLDLTQSNPNSSLELIPRSSSQVFSPSLAQDLISLPSILSEALYNNQSRVSGSETMEPSSPLAPILTQSHSFSDSVSAATAAITADPNFTSALMAAITSVIGNSNQPKSNVNNDTSEKQQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00049 483 MobiDBLite consensus disorder prediction 72 95 - -
Pte8g00049 483 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte8g00049 483 Coils Coil 100 134 - -
Pte8g00049 483 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 71 476 IPR044810 GO:0003700
Pte8g00049 483 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g00049 483 MobiDBLite consensus disorder prediction 155 184 - -
Pte8g00049 483 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte8g00049 483 FunFam probable WRKY transcription factor 31 230 307 - -
Pte8g00049 483 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g00049 483 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g00049 483 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00049 Pte-Chr8 1147720 1150863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00049 13 476 WRKY Transcription Factor Family AT1G62300 45.437 6.06e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte8g00049 WRKY 6.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00049 - - jre:108984287 399.438