Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00043 ATGGCGAATCTTCCTCAGTCTCTATCAATGAACGCACCATTTGGAGGGCTTGGTGGACTTGGTCAAGGCCTTGCCGGAGGTCAGGGGAACAAGGATAGGAAGATGGCTTCAGCCGAGCAATTGGTACTCGATCTCAGCAATCCCGATCTTCGAGAAAATGCTCTTCTTGAACTATCCAAGAAGAGAGAAATATTTCAAGATTTGGCTCCGCTCTTGTGGAATTCCTTTGGTACGATTGCTGCACTGTTACAGGAAATTGTTTCAATATATCCTGTTCTCTCTCCACCAAATCTGACTCCAGCACAATCAAATCGAGTATGCAATGCCCTAGCTCTTCTTCAGTGTGTAGCATCACACCCAGATACAAGGATGTTATTCCTCAATGCTCATATACCTTTGTATCTTTACCCTTTTCTTAATACAACGAGCAAGTCTAGGCCCTTTGAGTACTTGAGGCTCACCAGCTTAGGTGTCATTGGTGCTTTGGTGAAGGTTGATGATACTGAAGTCATCAGTTTCCTGCTCTCAACAGAGATAATTCCTCTGTGCCTTCGGACAATGGAAATGGGGAGCGAATTATCAAAAACAGTTGCAACATTTATAGTTCAAAAGATTCTATTGGATGATGTTGGCTTGGACTACGTCTGTACAACAGCTGAACGCTTCTTTGCAGTAGGCCGAGTTTTAGCAAACATGGTTACCACTCTTGCTGAGGCACCTTCTTCTCGTCTTTTGAAGCATATTGTTCGATGTTACCTTCGTCTCTCAGACAACTCGAGGGCTTGCGACGCATTAAGAAGTTGCCTTCCTGAGATGCTAAGAGATGCCACTTTCAGCAGTTGTCTGCGCGAGGATCCAACTACTAGGAGGTGGCTGCAGCAATTGCTTCACAATGTTGCAGGAAATAGGGTTCCTGGATTACAGGCTGGAGGAGGGTTTGATCATATGCTGTGA 954 0.4507 MANLPQSLSMNAPFGGLGGLGQGLAGGQGNKDRKMASAEQLVLDLSNPDLRENALLELSKKREIFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYVCTTAERFFAVGRVLANMVTTLAEAPSSRLLKHIVRCYLRLSDNSRACDALRSCLPEMLRDATFSSCLREDPTTRRWLQQLLHNVAGNRVPGLQAGGGFDHML* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00043 317 Pfam Cell differentiation family, Rcd1-like 41 299 - -
Pte8g00043 317 Gene3D - 29 300 IPR011989 -
Pte8g00043 317 FunFam Cell differentiation protein RCD1 31 302 - -
Pte8g00043 317 SUPERFAMILY ARM repeat 43 300 IPR016024 -
Pte8g00043 317 PANTHER UNCHARACTERIZED 31 302 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00043 Pte-Chr8 1068173 1072503 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Pte8g00043 Rcd1 7.6e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00043 K12606 - pop:7483613 571.622