Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00025 ATGTCCAATCCTGTAAACTTCACGCTCGAGATGTCTAGTCCTGCACGTATAAATGTTCTTTGTGGTGTTGGAATCCTTTCCACTCCATATGCAGCAAAAGAAGGTGGGTGGCTTGGGCTTTTTATATTATTCATTTTTGCAGTGTTGTCCTTTTATACTGGAATACTTTTGCGTAACTGCTTGGATAGCCAACCTGGTCTCGAGACTTATCCCGACATTGGGCAAGCAGCATTTGGCACGCCAGGAAGAATCGCCATTTCGCGTTTAACCCAATCCTCAAAACTACTCCTGCAGGCTTGTTGCATTGAATATATTATTCTGGAGAGTGACAACTTATCTTCACTGTTTCCAAATGCACACCTGAGTTTAGGTGGATATCAGATGAATGCTCATGTTTTGTTTGCGGTGGTTACAACCCTTGCCGTTCTTCCTACTGTTTGGCTACGAGACCTAAGTATCCTCAGCTACATCTCAGCTGGTGGAGTTATCGCATCGGTATTGGTGGTTATCTGCTTGTTCTGGTCTGGCATGGAAGAAGTAGGCTTTCATAGTAAAGGAACTGCACTAAATATAGCAACTCTACCTGTCGCTGTGGGCCTTTACGGTTACTGCTACTCAGGACATGCTGTTTTTCCAAACATCTATACATCAATGGCAAAGCCAAACCAATTCCCAGCAGTCCTCTTATCATGTTTTGGTATCTGTACTTTACTATATGCTGGAGTTGCTGTTATGGGATACACAATGTTTGGAGAATCAACATTGTCTCAATTTACTCTTAACATGCCCCAAAATTTGGTCGCCACCAAAATCGCTGTCTGGACCACGGTATGCTTACTACTATATACTTCTTTTATTTGTTCATGTTATTCTGTACAAATTTCTTGTTTCACGTATGCATTAACCATTTCCCCTGTAGCAATGTGTCTGGAGGAGTTGATACCATCAAAACATTCCAAGACTCACATATATGCCATTTTGATCAGAACGGGGCTGGTGGTTTCTACCCTTCTTGTTGGTCTTTCCATCCCATTTTTTGGCCTTGTCATGTCGCTTATTGGATCTTTACTCACAATGCTTGTTACCTTGATCCTTCCTTGTGTTTGCTTCCTAAGCATATTGAGGGCCAAAGTTACAAAAATGCAGGTGGCAATGTGCAGCATTGTTATTGCAGTAGGTGTTGTGTCGTCAAGCTTTGGAACATACTCAGCCACGTCCAAAATAATTGAGAATCTTCGTGGCTAA 1245 0.4217 MSNPVNFTLEMSSPARINVLCGVGILSTPYAAKEGGWLGLFILFIFAVLSFYTGILLRNCLDSQPGLETYPDIGQAAFGTPGRIAISRLTQSSKLLLQACCIEYIILESDNLSSLFPNAHLSLGGYQMNAHVLFAVVTTLAVLPTVWLRDLSILSYISAGGVIASVLVVICLFWSGMEEVGFHSKGTALNIATLPVAVGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLLSCFGICTLLYAGVAVMGYTMFGESTLSQFTLNMPQNLVATKIAVWTTVCLLLYTSFICSCYSVQISCFTYALTISPVAMCLEELIPSKHSKTHIYAILIRTGLVVSTLLVGLSIPFFGLVMSLIGSLLTMLVTLILPCVCFLSILRAKVTKMQVAMCSIVIAVGVVSSSFGTYSATSKIIENLRG* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00025 414 FunFam Amino acid transporter AVT1A 11 411 - -
Pte8g00025 414 PANTHER OS05G0424000 PROTEIN-RELATED 17 394 - -
Pte8g00025 414 Pfam Transmembrane amino acid transporter protein 17 402 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00025 Pte-Chr8 725283 739010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00025 17 347 Amino Acid or Auxin Permease AAAP Family AT2G39130 75.375 4.93e-175 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00025 K15015 - tcc:18586455 582.022