Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00022 ATGTCATCTTCATCGGATTCGTGGATTAAAGAGTACAATGAAGCTCTAAAACTTTCTGAAGATATCCATGGTATGATCTCTGAGCGGAGTTCATTCCCTGCATCAGGTCCAGAAACTCAGCGTCATGCATCTGCTATAAGAAGGAAGATCACCATTTTGGGTACTAGATTGGATAGCCTGCAGTCCCTTTTATCGAAACTTCCTGGGAAACAACCAATTTCAGAGAAGGAGATGAATCGTCGCAAGGACAATATTGCAAATTTGAGATCCAAAGTTAATCAGATGGCTTCCACTTTGAATATGTCAAACTTTGCAAACAGGGATAGTTTACTTGGACCAGAGACAAAATCTGCAGATGCAATGACCAGAACTGTTGGCCTTGACAACCAAGGTCTTGTTGGATTTCAACGACAAGTTATGAGAGAGCAAGATGATGGTCTTGAGAAATTAGAAGAGACTGTAATAAGTACAAAACATATTGCTTTGGCGGTGAATGAGGAGCTTGACCTACACACAAGGCTAATTGACGACTTGGATCAACATGTAGATGTTACAGATTCTCGATTAAGGAGGGTCCAGAAGAACTTGGCATTTTTGAACAAACGCACCAAGGGTGGTTGCACCTGTTTGTGCATGCTCCTTTCAGTCATTGGAATAGTTGTTCTGGTTGTTGTTGTATGGCTATTGATCAAATACTTGTAA 702 0.4088 MSSSSDSWIKEYNEALKLSEDIHGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDNIANLRSKVNQMASTLNMSNFANRDSLLGPETKSADAMTRTVGLDNQGLVGFQRQVMREQDDGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAFLNKRTKGGCTCLCMLLSVIGIVVLVVVVWLLIKYL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00022 233 SUPERFAMILY SNARE fusion complex 128 198 - -
Pte8g00022 233 Gene3D - 138 201 - -
Pte8g00022 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Pte8g00022 233 CDD SNARE_Qc 140 197 - -
Pte8g00022 233 Pfam SNARE domain 174 225 IPR000727 -
Pte8g00022 233 PANTHER SYNTAXIN 39 220 IPR045242 -
Pte8g00022 233 FunFam syntaxin-51 isoform X2 139 201 - -
Pte8g00022 233 SUPERFAMILY t-snare proteins 30 100 IPR010989 GO:0016020|GO:0016192
Pte8g00022 233 SMART tSNARE_6 132 199 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00022 Pte-Chr8 640158 643478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00022 1 234 SNARE and Associated Proteins AT1G16240 73.504 1.15e-128 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00022 K08503 - cit:102608030 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00022 8 640158 643478 Pte8g00022 8 640158 643478 RCT