Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00009 ATGGGTTCAAAATCTGTAGTAGATAGGATAGAATCATCCTCCTGTGTTCATTTTTCTGGATTTCACATGGATTGCTTGGAGCAAAGAAATGGTGAATTGGAGGAAACAACAACATCAGGAACTGGAGACATGGAAAAACAACCTTTTGTGATTGGTGTTGGTGGGGGAGCTGCATCTGGCAAAACTACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCACCGTGTTGTCCTTGTTAATCAGGATTCTTTCTATCATAATTTGACTGAGGAAGAACTTGCAAGAGTGCATGATTACAACTTTGACCACCCTGACGCTTTTGACACTGAGCAATTGGTGTCTGTTATGGATAAGTTAAGGCACGGGCAAGCTGTAGATATACCAAAGTATGACTTCAAAAGTTACAAAAGTGATGCATTTCCTCCAAGAAGGGTCAACCCTTCAGATGTTATAATTTTGGAAGGCATACTTGTTTTCCATGATCCTCGTGTCCGGGAGCTAATGAATATGAAAATATTTGTTGATACAGATTCTGATGTTCGGTTGGCTAGGAGGATCAGGCGTGACACGGTTGAGAAGAATAGGGATATTGGCATGGTTCTTGACCAGTACTCAAAATTTGTGAAGCCTGCTTTTGATGATTTTATTCTTCCTACTAAAAAATATGCTGATATTATCATCCCTCGTGGAGGAGACAATCATGTGGCCATTGATTTAATTGTACAACACATCTGTACAAAGCTAGGTCAACATGATCTCTGTAAAATATATCCTAACCTGTATGTTATTCAATCAACTTTTCAGATCCGTGGAATGCACACTCTGATACGTGATTCTCGTACCACAAAACATGATTTTGTATTTTATTCTGATCGTCTGATTCGTTTGGTTGTTGAACATGGTCTGGGACATCTTCCATTCACAGAAAAGCAAGTGATAACACCAACCCACTCTGTTTATACTGGTGTGGATTTCTGTAAGAGATTGTGTGGTGTCTCTATAATCAGAAGTGGTGAGAGCATGGAGAATGCTTTACGAGCATGTTGTAAAGGAATTAAGATCGGAAAGATTCTCATTCATAGAGAAGGTGACAACGGTCAGCAGCTCATCTACGAAAAGTTGCCTAAGGACATCTCTGATAGGCATGTTTTGCTACTGGATCCTATTTTAGGCACCGGTAATTCAGCGGTTCAAGCCATTTCATTACTTGTTAAGAAAGGTGTTCCCGAGTCCAACATCATTTTTCTCAATCTTATATCGGCACCTCAAGGCTTGCACATGGTATGCAAGCGCTTTCCAAGAATGAAAATAGTGACATCTGAAATTGAGATGGGTTTGAATAAGAACTTTCGTGTGATACCTGGCATGGGTGAATTCGGAGATCGGTACTTTGGAACGGATGATGACGACATTGAACAAGTGGTGACCCTTTCACTATAG 1443 0.4019 MGSKSVVDRIESSSCVHFSGFHMDCLEQRNGELEETTTSGTGDMEKQPFVIGVGGGAASGKTTVCDMIIQQLHDHRVVLVNQDSFYHNLTEEELARVHDYNFDHPDAFDTEQLVSVMDKLRHGQAVDIPKYDFKSYKSDAFPPRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDSDVRLARRIRRDTVEKNRDIGMVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHICTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSRTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTHSVYTGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPKDISDRHVLLLDPILGTGNSAVQAISLLVKKGVPESNIIFLNLISAPQGLHMVCKRFPRMKIVTSEIEMGLNKNFRVIPGMGEFGDRYFGTDDDDIEQVVTLSL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00009 480 Gene3D - 44 251 IPR027417 -
Pte8g00009 480 PRINTS Uridine kinase signature 48 65 - -
Pte8g00009 480 PRINTS Uridine kinase signature 123 138 - -
Pte8g00009 480 PRINTS Uridine kinase signature 78 89 - -
Pte8g00009 480 PRINTS Uridine kinase signature 194 205 - -
Pte8g00009 480 PRINTS Uridine kinase signature 216 229 - -
Pte8g00009 480 PRINTS Uridine kinase signature 180 190 - -
Pte8g00009 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 241 IPR027417 -
Pte8g00009 480 PANTHER URIDINE KINASE 45 378 - -
Pte8g00009 480 Gene3D - 252 467 IPR029057 -
Pte8g00009 480 FunFam Uridine kinase 252 467 - -
Pte8g00009 480 NCBIfam uridine kinase 46 248 IPR000764 -
Pte8g00009 480 SUPERFAMILY PRTase-like 251 468 IPR029057 -
Pte8g00009 480 CDD UMPK 50 245 IPR000764 -
Pte8g00009 480 Pfam Phosphoribulokinase / Uridine kinase family 50 236 IPR006083 GO:0005524|GO:0016301
Pte8g00009 480 FunFam Uridine kinase 45 251 - -
Pte8g00009 480 Pfam Uracil phosphoribosyltransferase 266 467 - -
Pte8g00009 480 CDD PRTases_typeI 325 440 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00009 Pte-Chr8 238523 244426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00009 1 470 PRT Gene Family AT4G26510 84.810 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00009 K00876 - zju:107407445 852.818