Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01426 ATGGATGATGATCCTCCGAGTAGTTCTTCTTGGGTCCCCAATGATACTGCTTTGGCTGCTGAGCAATATCTTCAGGCTGCTTCATGCGCTCTATGCCAAAAGTTCCTTTCATCAACTCGCAGGGTGAACAACGAGTTTGAACAGAGTCATGTGTGTGGGGATTGCAAATTTTTATTGCATGAGGACTTTAATACCCCTGTGACTGCATACCATCGAAGACACGGAGGAAGGCTTGGGTTTAGCAGTTCTGAGTCAGTTGAGAGTATTTTGTCTCAGCAATACGCTCATATGATGAACACTTTGAAGGAAAATCAACTTAATGCTTCTCATCAAGAATTTCAGTCAGTCAATGGCAATGCAGCTGATAGTTTACAGCGGTCTACAAGTTCTCGTACAACCCCAAGTGAGTCAAGAAGATGGAGGTGGGCTCTTTCTGATACTGAGAGTGAGTGTCTTGAAAATTTTGGTTCTCACTTTGGGGATAGTGAATCCAACGCCAGTTTAGGAAGGTACAGGCATAACGAGAGCGATTCTTTTTCTTTTAGTGCATATGGAGGTGATTCTGATGCCTCAGCGGATACGCATAGCATTACAGATTCAAGAATGTTTACTTTCCCTGGGGAGGATACAGAAATTGATTCTGATAGTGATACTGATATTGATCCTATGCATGCTGGTGTAAGTATATGGGAGTTAGATGATGAGGAGACAGAAGAAGACATGGATAACCAAAGGGGAAGGGAATTAACTGAGACTGAGGGAGAGGATGTTGGTAACCAGTTTCTGAATTTTTTGTCATCAAACCTAAATGAGACTGTTGCAGGTATTGATCAGAGACAGCTTCGGTCTCCTGACTCTGTGAATTTGATTCGCCCAAGAATAAGAGACAATTGGGAAACGTTTTCTGCTGACGTCTTCACTAACTCAGAGGAACAAGACTTACATTTATATGGAGGAAATTTAAGAGATCCTCTTAATTCCAGAGGATTTGATATTCTACTACAGAATTTTGTCGAAAATGGCATCTCAAGACGAGGTGCACCCCCGACGTCAGTCTCTTTCGTTGATAGTCTTCCACGTATTGCTATTACCGAGGAACAGGAGAAGGCTGAAAGGTTAGCCTGTGCAATTTGCAAAGATGTCTTGGCTGCAGGTACCGAAGTAAACCAGCTACCCTGCTTTCACCTCTATCACCCTTCTTGTATTTTTCCATGGTTGTGTTCGCGAAATTCTTGCCCCCTTTGTCGATATGAACTCCCTACAGATGACAAAGATTATGAAGAAGGAAAAAATCTTGATAGTAGATCGGTGGTCCATGAAATTGTGCAGAATGTTATTGATGACAGTCTCTCTGATATCTCTGACAGAGTTGAAGAAGATGAAGGGCATGAATTTGATACCGGAAGAGATCATCAGGGCCGAATGCTAACTGTTGGTCCTGACATCAATTCCACCGATCTGAGCAGTAGAGGAAGATGGTTTTTTCTCGCTGCTGCTCCTCTTGCAAGTCTGGTAGGAATTGCATTTGTATTGTGGTTTGGTAATCCTCTAACCGAAAGAAGAATGCCAACAGCAGGGAGAACCTTGTCTGAGCAAAATTGTCTCCAAGTACTGAGCTCTGTCTCGTCAAATGCAAGGGAGAATAGAAGCAGAAGGTGGTGGTGCAATTTCTAA 1674 0.4289 MDDDPPSSSSWVPNDTALAAEQYLQAASCALCQKFLSSTRRVNNEFEQSHVCGDCKFLLHEDFNTPVTAYHRRHGGRLGFSSSESVESILSQQYAHMMNTLKENQLNASHQEFQSVNGNAADSLQRSTSSRTTPSESRRWRWALSDTESECLENFGSHFGDSESNASLGRYRHNESDSFSFSAYGGDSDASADTHSITDSRMFTFPGEDTEIDSDSDTDIDPMHAGVSIWELDDEETEEDMDNQRGRELTETEGEDVGNQFLNFLSSNLNETVAGIDQRQLRSPDSVNLIRPRIRDNWETFSADVFTNSEEQDLHLYGGNLRDPLNSRGFDILLQNFVENGISRRGAPPTSVSFVDSLPRIAITEEQEKAERLACAICKDVLAAGTEVNQLPCFHLYHPSCIFPWLCSRNSCPLCRYELPTDDKDYEEGKNLDSRSVVHEIVQNVIDDSLSDISDRVEEDEGHEFDTGRDHQGRMLTVGPDINSTDLSSRGRWFFLAAAPLASLVGIAFVLWFGNPLTERRMPTAGRTLSEQNCLQVLSSVSSNARENRSRRWWCNF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01426 557 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 422 IPR013083 -
Pte7g01426 557 FunFam E3 ubiquitin-protein ligase RNF181 338 422 - -
Pte7g01426 557 Pfam Ring finger domain 374 416 IPR001841 -
Pte7g01426 557 SMART ring_2 375 415 IPR001841 -
Pte7g01426 557 MobiDBLite consensus disorder prediction 118 140 - -
Pte7g01426 557 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 258 420 - -
Pte7g01426 557 ProSiteProfiles Zinc finger RING-type profile. 375 416 IPR001841 -
Pte7g01426 557 SUPERFAMILY RING/U-box 354 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01426 Pte-Chr7 38467785 38470438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01426 24 558 C3H Transcription Factor Family AT5G01980 38.294 2.21e-95 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01426 - - qsa:O6P43_017495 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g01426 7 38467785 38470438 Pte7g01426 7 38467785 38470438 RCT