Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01415 ATGGAACCCTCTGCTTCCAATCCCGTTGACATTTTCAACAGACATACTTCCGGAACGGCTACCTCCCATTCAAGAAGATTAAGCTTTCTATCGGCCTCCAACATTGTCCAGGCGCCGCTGTATGCGTTGTTGGAATATTCTGGTTTAGTTAGAACCCGTTCCAATCACCAAGACACTGACACCTTCATAAATGGCAGCCCTCCTTTATCATCAGCATCAGCTGCGGATATCAGTGATGGAGAGGTGTCCATAAGGATAATTGGCGGAGCTGAAAATGAGCTAGATAGGGAAGGGACTGGCTTGGTGATCGGACACGTTGGAGAAACTATTTGCCAAAATGACATATCAATTGCTTCATCCATGGTTGGGATGCATGGTGCAGCGCCATCGGCACCAGTTTCAGAGACTCATCCAGATTCCAGAACTGATCGAGTTGCTGGGGAAGCTGTCTTGCATTCCACAAATGGTGCTACTGACACAGTAGGTGGGGAGGGAGGTGGACCGAATGGCAGAGATTCTTCATATCAAAGGTACGATATTCAACAGGCTGCCCGGTGGATTGAGCAAATTCTACCCTTCTCTTTGCTGTTGCTGGTGGTCTTCATTCGTCAGCATTTGCAAGGTTTCTTTGTTACAATTTGGATAGCTGCTGTCCTCTTCAAGTCAAATGATATATTACGGAAGCAAACTGCTCTCAAGGGTGAGAGGAAAATATCAGTATTAACAGGCATATCTATTGCATTTACACTTCATGTAATTGGTGTTTACTGGTGGTATCAGAATGATGATATACTATTTCCAATGGTCATGCTACCTCCCAGAGCTATACCTCCATTCTGGCATGCAGTTTTTATAATTTTGGTGAATGATACTATGGTTCGGCAGGCAGCAATGGTCATCAAGTGTATTCTTTTGATCTATTACAAAAACAGCAGAGGCCGTAACTATCGTAAGCAGGGACAAATGCTGACTTTAGTTGAGTATCTGTTACTGCTTTATCGTGCCTTGCTACCAACACCAGTCTGGTATCGTTTTTTCTTGAACAAGGATTATGGAAGTCTCTTTTCGTCCTTAATGACTGGGTTATACCTGACATTCAAGCTCACATCTGTTGTTGAAAAGGTGCAATCCTTATTTGCTGCTCTGAAGGCTCTTTCACATAAAGAGGTGCATTATGGAGCTTATGCAACATCAGAGCAGGTTCATTCTGCAGGGGACTTGTGTGCAATCTGCCAGGAGAAAATGCATACTCCTATTTTACTTCGCTGCAAGCACATTTTCTGTGAAGACTGTGTATCAGAATGGTTTGAGAGGGAAAGGACTTGCCCGTTATGTAGGGCTTTGGTGAGACCTGCTGATCTTAGATCATTTGGTGATGGTTCAACAAGCCTGTTCTTCCAGTTATTCTAG 1410 0.4397 MEPSASNPVDIFNRHTSGTATSHSRRLSFLSASNIVQAPLYALLEYSGLVRTRSNHQDTDTFINGSPPLSSASAADISDGEVSIRIIGGAENELDREGTGLVIGHVGETICQNDISIASSMVGMHGAAPSAPVSETHPDSRTDRVAGEAVLHSTNGATDTVGGEGGGPNGRDSSYQRYDIQQAARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKISVLTGISIAFTLHVIGVYWWYQNDDILFPMVMLPPRAIPPFWHAVFIILVNDTMVRQAAMVIKCILLIYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKDYGSLFSSLMTGLYLTFKLTSVVEKVQSLFAALKALSHKEVHYGAYATSEQVHSAGDLCAICQEKMHTPILLRCKHIFCEDCVSEWFERERTCPLCRALVRPADLRSFGDGSTSLFFQLF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01415 469 SMART ring_2 408 445 IPR001841 -
Pte7g01415 469 MobiDBLite consensus disorder prediction 154 173 - -
Pte7g01415 469 ProSitePatterns Zinc finger RING-type signature. 423 432 IPR017907 -
Pte7g01415 469 ProSiteProfiles Zinc finger RING-type profile. 408 446 IPR001841 -
Pte7g01415 469 Pfam Zinc finger, C3HC4 type (RING finger) 406 448 - -
Pte7g01415 469 CDD RING-HC_RNFT1-like 406 446 - -
Pte7g01415 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 383 455 IPR013083 -
Pte7g01415 469 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 21 469 IPR044235 GO:0061630|GO:1904294
Pte7g01415 469 SUPERFAMILY RING/U-box 399 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01415 Pte-Chr7 38367417 38374454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01415 25 470 C3H Transcription Factor Family AT5G01960 68.071 0.0 619
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g01415 7 38367417 38374454 Pte7g01415 7 38367417 38374454 RCT