Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte7g01409 | ATGTGGCCAGGAGGTGTACCTGAGAGCCGTTCAGTTCAGGCAATACTAGATTGGCAAAGAAGAACGATGGAGATGATGTACACTGATATTGTTGCAGCAATACGTAGAAAAGGAATTCAGGCTAACCCGAGGGACTACTTGTCATTTTTCTGCCTCGGAAACAGGGAGACGAAGAAAGTCGGAGAATACGTACCTCCAGAAACACCAGAACCCAACACTGATTACAGCAGAGCTCAACATTCCCGTCGCTTTATGATATATGTTCATGCCAAGATGATGATAGTTGATGACGAGTACATCATCATTGGGTCCGCAAACATTAACCAAAGATCAATGGATGGGGCGAGGGACACAGAAATAGCTATGGGAGCATTCCAGCCGCATCACCTTACAGCTTGGGGACCACCTAGGGGTCACATATATGGGTTCAGAAGAGCACTGTGGTATGAGCACTTTGGAGAGCCTGACGATGAAGCCTTTAACCATCCAGAACGAGAGGAATGCATCAAGCTTGTCAATCGTATAGCTGAGCTGAATTGGAATTTGTACGCAGAGGACACGGCGAGGAGCGACTTGCGGGTTCACCTCCTGCGCTATCCTATTGAAGTGAGCGGTGATGGCACGATCGGGACATTGCATGGTTTAGACCACTTTCCTGACACGGAGGCTCGAATCTTGGGTTCCAAATCTGAGAACCTTTCCCCAATTCTCACAACCTAG | 720 | 0.4806 | MWPGGVPESRSVQAILDWQRRTMEMMYTDIVAAIRRKGIQANPRDYLSFFCLGNRETKKVGEYVPPETPEPNTDYSRAQHSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAFQPHHLTAWGPPRGHIYGFRRALWYEHFGEPDDEAFNHPEREECIKLVNRIAELNWNLYAEDTARSDLRVHLLRYPIEVSGDGTIGTLHGLDHFPDTEARILGSKSENLSPILTT* | 240 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte7g01409 | 239 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 84 | 111 | IPR001736 | GO:0003824 | |
| Pte7g01409 | 239 | PANTHER | PHOSPHOLIPASE D | 1 | 228 | IPR015679 | - | |
| Pte7g01409 | 239 | SMART | pld_4 | 84 | 111 | IPR001736 | GO:0003824 | |
| Pte7g01409 | 239 | SUPERFAMILY | Phospholipase D/nuclease | 80 | 165 | - | - | |
| Pte7g01409 | 239 | Pfam | Phospholipase D Active site motif | 85 | 111 | IPR001736 | GO:0003824 | |
| Pte7g01409 | 239 | Pfam | Phospholipase D C terminal | 157 | 229 | IPR024632 | - | |
| Pte7g01409 | 239 | Gene3D | Endonuclease Chain A | 3 | 130 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte7g01409 | Pte-Chr7 | 38295548 | 38296367 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte7g01409 | 1 | 240 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 65.833 | 3.17e-109 | 330 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte7g01409 | K01115 | - | qsa:O6P43_019442 | 353.214 |