Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01401 ATGGTTTCCACTCAGTTATCTGGTCTTCCCGACAAAAGCAAGCCAATTAAGTCCCAGTTACTGCTTCCTGTGAATCTCACTGGTGCTACAGTTACCGAGCATCTAGAACTTGATTTTTCAGATGTTTTTGGTCCAGTTACTATCCCTGCCTGTAAAGAAATAGATAATAGCAATTGTGGTGACACTGATGCAGAAATTGATAGTGCCCTTATTTATGGTGATCCAACAGTCATTTTCAGCCGCTCTCACTCCTTGGTAGGACCCTCTTCTTATGTTAACCAATCTTTGAAGCTCAGTAAACTCACCATATGTGGGAAAGAGAATTCGGAGGGTTCTGTCCAAGTTGGTGCGAACTCAATCAGAGAATATGAGGAATGTGCTGCTGAGGATGTTGTTGAGGAATCTTTTGTAGAAGCTGGCGAAGCTTTTAAGGTCAGTATTGACGATTTTGAGGTACTAAAGGTTGTTGGGCAGGGTGCATTTGGGAAAGTATATCAAGTTAGAAAAAGAGGCACATCAGAAATATATGCCATGAAAGTAATGCGCAAGGACAGGATTGTGGAGAAGAACCATTCTGATTATATGAAAGCTGAGAGGGATATCTTGACGAAAGTAGAGCACCCTTTCATTGTCCAGCTGAGATACTCTTTTCAAACAAAATATCGACTTTATCTGGTGCTTGACTTTGTCAATGGGGGTCACCTTTTTTTCCAACTCTATCACCAAGGCCTTTTCAGAGAGGAGCTGGCACGCATATATGCTGCTGAGATTGTTTCTGCTGTTGCTCATCTTCATCAAAATGGCATAATGCACAGGGATCTGAAGCCAGAAAACATATTGCTTGATGCAGATGGCCATGTTATGTTGACAGATTTTGGGCTAGCGAAGGAGTTCGATGAGAATACAAGATCCAATTCCATGTGTGGTACGGTAGAATACATGTCACCTGAAATTATTCTTGGGAAGGGCCACGATAAGGCTGCAGACTGGTGGAGTGTCGGAGTGCTTCTTTTTGAGATGCTTACTGGGAAGCCTCCTTTCATTGGCGGGAACCGTGACAAGGTGCAGCAGAAGATAGTAAAGGACAAGTTGAAGCTACCTGCATATTTGTCTAGTGAAGCGCATTCATTATTAAAAGGGTTGCTACAAAAGGATGCAAGCAAACGGTTAGCTAGTGGACCGGCAGGAAGTGATGAAATCAAACGCCACAAATGGTTCAAAACAATCAATTGGAAAAAATTGAATGCCAGGGAAATTCAACCAAGCTTTAGGCCTGAAGTGGCTGGTAAGCATTGCATTGCCAACTTTGAGAAGCGTTGGACAGATATGCCAGTTGTGGATTCTCCAGCTGCCAGCCCAAGTGGCGGAAACCCTTTTAAGGACTTCACTTACGTTAGACCAGCAGCTTCTTTTCTTCAAAGGGACAAGTCCTGTTCGCTAGACTGCTCGCTCTCCTCCCTCGCACGCAAGATTTGA 1476 0.4363 MVSTQLSGLPDKSKPIKSQLLLPVNLTGATVTEHLELDFSDVFGPVTIPACKEIDNSNCGDTDAEIDSALIYGDPTVIFSRSHSLVGPSSYVNQSLKLSKLTICGKENSEGSVQVGANSIREYEECAAEDVVEESFVEAGEAFKVSIDDFEVLKVVGQGAFGKVYQVRKRGTSEIYAMKVMRKDRIVEKNHSDYMKAERDILTKVEHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREELARIYAAEIVSAVAHLHQNGIMHRDLKPENILLDADGHVMLTDFGLAKEFDENTRSNSMCGTVEYMSPEIILGKGHDKAADWWSVGVLLFEMLTGKPPFIGGNRDKVQQKIVKDKLKLPAYLSSEAHSLLKGLLQKDASKRLASGPAGSDEIKRHKWFKTINWKKLNAREIQPSFRPEVAGKHCIANFEKRWTDMPVVDSPAASPSGGNPFKDFTYVRPAASFLQRDKSCSLDCSLSSLARKI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01401 491 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Pte7g01401 491 Gene3D Transferase(Phosphotransferase) domain 1 230 425 - -
Pte7g01401 491 CDD STKc_AGC 156 406 IPR045270 GO:0004674|GO:0005524
Pte7g01401 491 ProSiteProfiles AGC-kinase C-terminal domain profile. 407 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte7g01401 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Pte7g01401 491 FunFam Non-specific serine/threonine protein kinase 230 425 - -
Pte7g01401 491 FunFam Non-specific serine/threonine protein kinase 147 254 - -
Pte7g01401 491 SUPERFAMILY Protein kinase-like (PK-like) 147 461 IPR011009 -
Pte7g01401 491 SMART pkinase_C_6 407 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte7g01401 491 Pfam Protein kinase domain 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01401 491 SMART serkin_6 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01401 491 PANTHER RIBOSOMAL PROTEIN S6 KINASE 110 469 - -
Pte7g01401 491 Gene3D Phosphorylase Kinase; domain 1 147 447 - -
Pte7g01401 491 ProSiteProfiles Protein kinase domain profile. 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01401 491 Pfam Protein kinase C terminal domain 428 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01401 Pte-Chr7 38244592 38248996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01401 1 477 AGC Kinase Gene Family AT3G08720 64.803 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pte7g01401 Pkinase 3.8e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01401 K04688 - qsa:O6P43_026363 718.383