Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01395 ATGAAGGAGATCGAGACGGGAGGTGAAGATGCAATAGACGATGATATGTTTGGTAGTGGGCATCGTTCGACTAGTCTTCTGCCTCCTGTCTTCTCCTTTGAAGAACTCGAAGCATCTACAAATCGGTTTGACCCCAAGCGTAAAATTGGTGATGGAGGTTTTGGCTCCGTTTATCTGGGCCAGCTCTATGATGACCGAATTGTTGCAGTGAAGTATTGCAGTGATCCAAGGGGTTTATTACTGGTTTATGACTATGTGGCTAATGGAACTCTTGTTGATCACCTCCATGGCCCGCAATGTCCGTATAGAAAAGTGTCTTTGACGTGGCAGGTGAGACTTGACATCGCTTTACAAATATCCTCAGCAATGGAGTACCTTCACTTTTCAGTTCTGCCACCCATAGTCCATCGAGACATAACCTCCTCAAACATCTTCGTAGAGAAAGATATAAGGATCAAAGTTGGAGACTTTGGACTGTCTAGACTATTGGTTTTCCACGATAACTCTCCATCTTCATCTGGATATGTCTGGACAGGACCTCAAGGTCACAGTAGGTTGTCTGATGGGTTAGGTTCTTCATTGCACAGATTGCAGACAGATTTTGGCAGTGAAACGTACATGCCTAAAGAAAGACTTATCTCGATGAAAATGCAACTCACCTGTGTGTTCCTGTATCTAGTCTTTGCTCCTGTTCTCATACATTCATTTGACTCCACTTTCAACGATGATGTCCTGGGGTTGATTGTTTTCAAGGCCGGACTTGAGGATCCAAAAGCTAAACTTGTGACATGGAATGAAGAGGACAGCAGTCCCTGCATCTGGGATGGAGTGAAATGCGATCCTGTAACCAACAGAGTGACTTCACTAGTTCTTGACGGGTTCTCTCTTTCTGGACACGTCAACAAGGGACTGTTAAGATTGCAGTTCCTTCAGATTCTATCACTAGCCAACAATAACTTCACAGGGACTATAAACCCCGATCTTGGTCATCTTTGGAGTTTACAAGTTATTGATTTGAGTGACAACAATCTCTCAGGCTCAATTCCTGAGGGATTTTTCCAACAATGCGGTTCTCTAAGAGTGGTCTCTTTTGCTAAGAACAAGCTCTCAGGGAACTTTCCCGTTTCTTTAAGCTCATGCTCAACGTTGGCAACTCTTAACTTCTCATCCAATCTGCTGTCTGGGAAATTGCCCTCTGGAATATGGTTTTTGAGGGGACTTCAGTCACTTGATCTCTCAGCTAACTTGCTAGAGGGAGAGATTCCTAAAGGAATTGACAATCTTTATGATTTGAGAGAAATAAATCTGCAGAGAAACCGCTTCATTGGTAGGCTGCCAGATGATATTGGAAGCTGTTTGCTTTTAAAGTTGATTGATTTCAGTGGGAATTTTCTCTCTGGAGACCTTCCAGAGTCAATGCAAAGACTTAGTTCTTGTACTTCTCTTAGTTTAAGGGGGAATTCATTTACTGGAGGAATTCCTGATTGGATTGGAGACATGAAAAACTTAGAGATATTGGATCTTTCTGCAAATAGGTTTTCCGGTTCGATTCCAAAATCCATAGGAAATCTTCAATTGTTGATCAACCTAAACCTATCCACCAACCAGCTTAGTGGAAGTTTGCCCGAGTCTATATCTAATTGTGCCAGACTTTTGGCTCTAGATGTCAGTCACAATAAATTCAATGGCACGTTTCCTGAATGGATCTTCAGGATGGATGTGCAAAGTTTTTCATCTGGAAACAATGAAAGTTCAAGCAGTTACCCTTCACTCACTTCCATATCACCACCTTACAGAGGTCTTCAGCTTTTGGATTTATCATCAAATTCATTTTCTGGAAGCATTCCGTCCAGCATTGGCAATCTTCGCAGCTTGCAGGTTCTCAATATGTCAATGAACTATCTCTTTGGAACTATTCCTACTGCTGTAGGTGAATTGAAATCGTTGTATGTACTTGATTTGAGTGCAAATCAGCTTAACGGAGGCATTCCTTCTGAAATAGGAGAGACTGTTTCAATCAATGAACTCATATTGAAGAAAAATTGCTTATCGGGGAAAATCCCAACCGAGATTGCAAAATGCACATCATTGACATCTTTGATTCTATCGCAGAACAACCTCACTGGTTCAGTTCCTGCAGCGATTGCAAACCTAACCAATCTTCAATATGTAGACTTATCCTTCAATAAACTCACTGGAAACCTACCCAAAGAATTGACAAATCTTTCCCACCTTGTATACTTTAATTTGTCATACAACCACCTTCAAGGTGAGTTACCGTTGGGTGGCTACTTCAATACAATCTCTCCTGCGTTGGTGTTTGGAAACCCATCCCTATGTGGTTCAGTTGTAAACCGCACCTGTCCTGCGGTTCATCCCAAACCTATTGTGCTTAATCCTAATTCTTCTAGTTCCACCGGAAATCCTTCCAATTCTAATAAGCATCAGAAGAAAATCTTGCTCAGCGTCTCTTCCCTCATTGCCATTGGTGCAGCTGCTTCCATTGCCATTGGGGTGATTGCAGTTACCGTTCTTAATATCCATGCACGCTCTTCTATGTCACATTCTGCTGCTCCGCTCACATTATCTGGTGCCCATGATTTCAGTTGTTCACCTACTAAAGACCCGAACTATGGTAAGCTTGTCATGTTTCATGGCAACGCTGACTTTGCTATTGGTGCCAACAATCTCCTTAATAAGGAGGTTGAGATTGGACGCGGAGGCTTTGGAGTTGTTTATCACACTGCCCTCCAAGATGGCCGTTCCGTCGCAATTAAGAAGCTGACAGTCTCGAGTTTGATCAAATCACAAGAAGATTTTGAGAGGGAAGTGCAAAACCTGGGGAAGATTAGACACCGGAATCTTGTAGCACTTGAAGGATATTATTGGACTTCATCGTTGCAGCTTCTTATTTATGAATACGTGTCTAAAGGAAGCTTGTATAAGCTTCTCCATGAAGATAACAGCATTTGCTGCCTCTCCTGGCGACAAAGGTTTGGCATAGTTCTCGGCATTGCCAAAGGTTTAGCCCAATTGCACCATATGAACATAATCCATTATAATCTCAAGTCAACGAATATTCTGATAGACAGCTCTGGTCAGCCAAGAGTAGCAGATTTCGGTTTGGTGAAACTATTGCCAGTAATAGACCATTGCGTCTTGAGCAGCAAAATTCAGAGTGCGCTTGGATACATGGCTCCTGAGTTTGCCTGCCGTACGGTGAAGATAACTGAAAAGTGTGATGTGTATGGCTTTGGGGTTCTGGTCCTGGAGGTAGTAACAGGAAAGAAACCTGTTGAATACTTGGAGGATGATGTGGTTGTTCTGTGTGATAGGGTGAGGGAGGCTTTGGAGGAAGGCAGGATGGAGCAATGCATTGATCATAGGCTCCTGGGTAATTTTCCTGCAGAGGAGGCAGTTCCAGTACTGAAGTTAGGCCTCGTCTGTGCATCTCAAGTACCATCCAATCGTCCGGATATGAATGAGGTAATAAATATTCTAGAGCTGATTCAATGCCCTTCAGAAGGACAAGAGGAACTACAATAG 3546 0.4284 MKEIETGGEDAIDDDMFGSGHRSTSLLPPVFSFEELEASTNRFDPKRKIGDGGFGSVYLGQLYDDRIVAVKYCSDPRGLLLVYDYVANGTLVDHLHGPQCPYRKVSLTWQVRLDIALQISSAMEYLHFSVLPPIVHRDITSSNIFVEKDIRIKVGDFGLSRLLVFHDNSPSSSGYVWTGPQGHSRLSDGLGSSLHRLQTDFGSETYMPKERLISMKMQLTCVFLYLVFAPVLIHSFDSTFNDDVLGLIVFKAGLEDPKAKLVTWNEEDSSPCIWDGVKCDPVTNRVTSLVLDGFSLSGHVNKGLLRLQFLQILSLANNNFTGTINPDLGHLWSLQVIDLSDNNLSGSIPEGFFQQCGSLRVVSFAKNKLSGNFPVSLSSCSTLATLNFSSNLLSGKLPSGIWFLRGLQSLDLSANLLEGEIPKGIDNLYDLREINLQRNRFIGRLPDDIGSCLLLKLIDFSGNFLSGDLPESMQRLSSCTSLSLRGNSFTGGIPDWIGDMKNLEILDLSANRFSGSIPKSIGNLQLLINLNLSTNQLSGSLPESISNCARLLALDVSHNKFNGTFPEWIFRMDVQSFSSGNNESSSSYPSLTSISPPYRGLQLLDLSSNSFSGSIPSSIGNLRSLQVLNMSMNYLFGTIPTAVGELKSLYVLDLSANQLNGGIPSEIGETVSINELILKKNCLSGKIPTEIAKCTSLTSLILSQNNLTGSVPAAIANLTNLQYVDLSFNKLTGNLPKELTNLSHLVYFNLSYNHLQGELPLGGYFNTISPALVFGNPSLCGSVVNRTCPAVHPKPIVLNPNSSSSTGNPSNSNKHQKKILLSVSSLIAIGAAASIAIGVIAVTVLNIHARSSMSHSAAPLTLSGAHDFSCSPTKDPNYGKLVMFHGNADFAIGANNLLNKEVEIGRGGFGVVYHTALQDGRSVAIKKLTVSSLIKSQEDFEREVQNLGKIRHRNLVALEGYYWTSSLQLLIYEYVSKGSLYKLLHEDNSICCLSWRQRFGIVLGIAKGLAQLHHMNIIHYNLKSTNILIDSSGQPRVADFGLVKLLPVIDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKKPVEYLEDDVVVLCDRVREALEEGRMEQCIDHRLLGNFPAEEAVPVLKLGLVCASQVPSNRPDMNEVINILELIQCPSEGQEELQ* 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01395 1181 Gene3D Phosphorylase Kinase; domain 1 21 79 - -
Pte7g01395 1181 Gene3D Phosphorylase Kinase; domain 1 889 974 - -
Pte7g01395 1181 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 520 792 - -
Pte7g01395 1181 ProSitePatterns Tyrosine protein kinases specific active-site signature. 134 146 IPR008266 GO:0004672|GO:0006468
Pte7g01395 1181 ProSitePatterns Protein kinases ATP-binding region signature. 904 927 IPR017441 GO:0005524
Pte7g01395 1181 Gene3D Ribonuclease Inhibitor 501 791 IPR032675 -
Pte7g01395 1181 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 241 519 - -
Pte7g01395 1181 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 31 176 - -
Pte7g01395 1181 ProSiteProfiles Protein kinase domain profile. 898 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01395 1181 Pfam Protein kinase domain 900 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01395 1181 Gene3D Ribonuclease Inhibitor 241 399 IPR032675 -
Pte7g01395 1181 Gene3D Ribonuclease Inhibitor 400 496 IPR032675 -
Pte7g01395 1181 ProSiteProfiles Protein kinase domain profile. 1 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01395 1181 SMART LRR_typ_2 694 717 IPR003591 -
Pte7g01395 1181 SMART LRR_typ_2 524 548 IPR003591 -
Pte7g01395 1181 SMART LRR_typ_2 331 355 IPR003591 -
Pte7g01395 1181 SMART LRR_typ_2 428 452 IPR003591 -
Pte7g01395 1181 SMART LRR_typ_2 718 742 IPR003591 -
Pte7g01395 1181 SMART LRR_typ_2 646 670 IPR003591 -
Pte7g01395 1181 SMART LRR_typ_2 500 523 IPR003591 -
Pte7g01395 1181 SMART LRR_typ_2 404 427 IPR003591 -
Pte7g01395 1181 SUPERFAMILY L domain-like 260 572 - -
Pte7g01395 1181 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 975 1176 - -
Pte7g01395 1181 Pfam Protein tyrosine and serine/threonine kinase 71 167 IPR001245 GO:0004672|GO:0006468
Pte7g01395 1181 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Pte7g01395 1181 SMART LRR_sd22_2 718 744 - -
Pte7g01395 1181 SMART LRR_sd22_2 500 526 - -
Pte7g01395 1181 SMART LRR_sd22_2 404 427 - -
Pte7g01395 1181 SUPERFAMILY Protein kinase-like (PK-like) 23 215 IPR011009 -
Pte7g01395 1181 Pfam Leucine rich repeat 696 755 IPR001611 GO:0005515
Pte7g01395 1181 Pfam Leucine rich repeat 599 659 IPR001611 GO:0005515
Pte7g01395 1181 Pfam Leucine rich repeat 502 561 IPR001611 GO:0005515
Pte7g01395 1181 SUPERFAMILY L domain-like 494 768 - -
Pte7g01395 1181 Pfam Leucine rich repeat N-terminal domain 241 280 IPR013210 -
Pte7g01395 1181 CDD STKc_IRAK 904 1170 - -
Pte7g01395 1181 Gene3D Transferase(Phosphotransferase) domain 1 975 1179 - -
Pte7g01395 1181 SUPERFAMILY Protein kinase-like (PK-like) 901 1173 IPR011009 -
Pte7g01395 1181 Gene3D Transferase(Phosphotransferase) domain 1 86 221 - -
Pte7g01395 1181 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 892 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01395 Pte-Chr7 38204572 38211368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01395 48 164 Receptor kinase-like Gene Family AT5G01890 31.788 2.27e-12 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pte7g01395 Pkinase 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01395 - - qsa:O6P43_016464 1419.45