Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01340 ATGGCTTCAAGAAGCTCAGAGGCTTCAGCCAAAGAACGCCTTCGTTGGACAAATGAGTTACATGAGCAGTTTGTTGAGGCCGTGACAAGGCTTGGTGGCCCTGACAGAGCTACACCTAAGGTAATCCTAAAGGCCATGGGGGTTCCTGGTTTAAATACTTTCCATGTCAAAAGCCATTTGCAGAAATACAGAATCTCAAAATTTATTCCAGAATCAACCACCAGAGCCAAGTTTGAGAGAAGGAGCATATCAGAGCTTCTACCTAATTTCAGGACTAAATCTGCCCTTCAGCTTAAGGAAGCCTTGCAGATGCAATTTCTAGTACAAAAGCAGCTAAATGATCGAAACAAGGTACATAAGAGCCTAAAGCTCAAGATTGAAGCACAAGCCAGATACCTGGAGAGGATTGGACAAGAAGAGAATAGTTGTGAAAATATCATGTTTCCCAAGACATTTTCTCCAGAATTTTCATCTTCCTCAGTCCGTGGCATTGAATCAAACACAAAGGAAAGTGAATCAGCTTGTGAAAGACAATGTAAGGAAGAGTTGAGAGCTGCAAAAAGGCTCAAGACTGAAGATAATACACTAGCACCAACTCTAGAACTTGCTTCATGGAACCCAAACACCAGCTTGCGGTCATCTTAG 645 0.4248 MASRSSEASAKERLRWTNELHEQFVEAVTRLGGPDRATPKVILKAMGVPGLNTFHVKSHLQKYRISKFIPESTTRAKFERRSISELLPNFRTKSALQLKEALQMQFLVQKQLNDRNKVHKSLKLKIEAQARYLERIGQEENSCENIMFPKTFSPEFSSSSVRGIESNTKESESACERQCKEELRAAKRLKTEDNTLAPTLELASWNPNTSLRSS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01340 214 SUPERFAMILY Homeodomain-like 10 65 IPR009057 -
Pte7g01340 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 68 IPR017930 -
Pte7g01340 214 MobiDBLite consensus disorder prediction 156 175 - -
Pte7g01340 214 NCBIfam myb-like DNA-binding domain, SHAQKYF class 11 66 IPR006447 GO:0003677
Pte7g01340 214 Pfam Myb-like DNA-binding domain 14 64 IPR001005 -
Pte7g01340 214 Gene3D - 10 69 - -
Pte7g01340 214 FunFam Myb family transcription factor 10 68 - -
Pte7g01340 214 Pfam MYB-CC type transfactor, LHEQLE motif 97 137 IPR025756 -
Pte7g01340 214 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 176 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01340 Pte-Chr7 37720723 37722067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01340 3 140 G2-like Transcription Factor Family AT3G13040 46.853 3.51e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte7g01340 Myb_DNA-binding 5.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01340 - - vri:117921109 212.616