Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01339 ATGGGAAATTGTTGTAGATCTCCGGCGGCAGTTGCTCGAGAGGACGTGAAATCGAGCTTCTCGGGTAACGATCATGTCCGGAGAGACTCAAATGGGGGAAAGAAAGCTCCGACCACTGTGTTAACCGACGTGACGAAGGAGAATATTGAGGAGAAGTATTTGGTGGATCGAGAGCTTGGTCGGGGAGAGTTTGGGGTTACTTATCTTTGCATTGACAGGGACACTAGGGAATTGCTTGCTTGTAAGAGCATTTCCAAGCGGAAGCTGAGGACGGCAGTTGATATTGATGACGTGAGGCGCGAGGTTGCGATAATGAAGCATTTGCCTAAGAGTTCAAGCATTGTGAGTTTCAGGGAAGCATGTGAGGATGACAATGCGGTACACTTGGTGATGGAGTTGTGTGAAGGTGGTGAGCTGTTTGACCGGATTGTGGCTCGGGGGCATTATACGGAACGAGCGGCTGCGGCGGTGACGAGGACAATTGTGGAGGTTGTGCAGTTGTGCCATAAACATGGGGTTATTCACAGAGACTTGAAGCCTGAGAACTTTTTGTTTGCTAATAAGAAGGAAAATTCGCCATTGAAAGCTATTGATTTTGGGTTGTCAATATTCTTCAAGCCAGGAGAAAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTTCTCAAGAGAAATTATGGCCCAGAAATTGATATCTGGAGTGCTGGAGTGATACTATACATTTTGCTGTGTGGGGTTCCTCCATTTTGGGCTGAATCTGAACAAGGAGTTGCACAGGCGATACTTCGAGGCATAATTGATTTCAAACGTGACCCTTGGCCCAGTATTTCTGATGGTGCAAAGAGTCTTGTCAGGCAAATGCTGGAACCAGATCCCAAGCTTCGACTAACTGCAAAGCAGGTGCTTGAGCATCCATGGCTGCAAAATGCTAAAAAAGCCCCAAATGTTCCTCTTGGTGATGTTGTCAAATCCAGGCTTAAGCAGTTTTCAATGATGAACAGATTTAAGAGAAAAGCATTGAGGGTGATTGGTGATTTCTTATCTGTTGAAGAAGTGGAAGACATCAAAGAAATGTTTAAAAAGATGGATAGTGATAATGACGGTATCGTGTCTACAGATGAATTGACAGCTGGATTCCGGAATTTTGCTCCCCAGATAGCAGAGTCAGAAGTCCAAATGCTCATAGAAGCTGTTGATAATGGGAAGGGAACCCTAGATTATGGAGAATTTGTTGCTGTTTCACTCCATTTGAAACGGGTTGCAAACGATGAACATCTTCACAAGGCCTTCTCTTACTTCGACAAAGATGGTAATGGTTATATTGAACCTGAGGAACTGCAAAAAGCCTTAATGGAAGATGGAGCAGACGATTGTGCAGCTGTGGCAAATGATATATTCCAGGAAGTAGACACAGACAAGGATGGGCGAATCAGCTATGATGAATTTGTAGCAATGATGAAAACTGGAACAGATTGGAGAAAGGCTTCTCGACATTACTCAAGAGGCAGATTCAACAGCCTAAGCTTGAAGCTTATGAAAGATGGTTCTCTGAACTTGGGGGCTGATCAGAATCTATAG 1590 0.444 MGNCCRSPAAVAREDVKSSFSGNDHVRRDSNGGKKAPTTVLTDVTKENIEEKYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKSSSIVSFREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGIIDFKRDPWPSISDGAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIGDFLSVEEVEDIKEMFKKMDSDNDGIVSTDELTAGFRNFAPQIAESEVQMLIEAVDNGKGTLDYGEFVAVSLHLKRVANDEHLHKAFSYFDKDGNGYIEPEELQKALMEDGADDCAAVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGADQNL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01339 529 FunFam calcium-dependent protein kinase 13 139 319 - -
Pte7g01339 529 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Pte7g01339 529 Gene3D Transferase(Phosphotransferase) domain 1 139 319 - -
Pte7g01339 529 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01339 529 CDD STKc_CAMK 52 310 - -
Pte7g01339 529 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Pte7g01339 529 CDD EFh 429 491 IPR002048 GO:0005509
Pte7g01339 529 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Pte7g01339 529 MobiDBLite consensus disorder prediction 18 32 - -
Pte7g01339 529 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Pte7g01339 529 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Pte7g01339 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 486 - -
Pte7g01339 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pte7g01339 529 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01339 529 SUPERFAMILY Protein kinase-like (PK-like) 38 336 IPR011009 -
Pte7g01339 529 Gene3D - 320 494 - -
Pte7g01339 529 FunFam Calcium-dependent protein kinase 7 320 494 - -
Pte7g01339 529 Pfam EF-hand domain pair 428 491 IPR002048 GO:0005509
Pte7g01339 529 SUPERFAMILY EF-hand 340 517 IPR011992 -
Pte7g01339 529 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Pte7g01339 529 MobiDBLite consensus disorder prediction 16 38 - -
Pte7g01339 529 Gene3D Phosphorylase Kinase; domain 1 54 138 - -
Pte7g01339 529 Pfam EF hand 359 380 IPR002048 GO:0005509
Pte7g01339 529 SMART efh_1 358 386 IPR002048 GO:0005509
Pte7g01339 529 SMART efh_1 465 493 IPR002048 GO:0005509
Pte7g01339 529 SMART efh_1 429 457 IPR002048 GO:0005509
Pte7g01339 529 SMART efh_1 394 421 IPR002048 GO:0005509
Pte7g01339 529 Pfam Protein kinase domain 55 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01339 529 FunFam Calcium-dependent protein kinase 1 55 138 - -
Pte7g01339 529 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01339 Pte-Chr7 37713071 37719791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01339 1 402 EF-hand Containing Proteins AT3G51850 87.593 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte7g01339 Pkinase 6.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01339 K13412 - jre:108994928 974.541