Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01325 ATGGGAGCTCGTTGCTCTAAATTCTCATTCTGTTGGTTCCACTCCCACCTGAAGCAATCTGTTCTTGAGTCCTCTGACTTCGAAAATGGAGGCAAAAGCGACCAAAAGCTTTGGCCAAGCTTCTGCGAGTTCAGTTTGGACCAATTAAAGGTCGCTACCAATGGGTTCGCTTCAGATAACATTGTATCAGAACATGGTGAGAAAGCTCCGAATGTTGTTTACAAGGGACAGCTCAGTAGTGGTCTTTGGGTTGCTGTTAAACGCTTCAACAAGTTTGCCTGGCCCGATTCTCGTCAATTCCTTGAAGAAGCAAGATCGGTGGGAAGTCTGAGAAGTGAGAGATTGGCCAACTTGATTGGTTGTTGCTGTGAAGGCGATGACAGGTTGCTGGTGGCGGAGTTTATGTCCCATGAAACTCTAGCAAAACATCTTTTTCACTGGGAAGCACAGCCAATGAAATGGGCAATGAGACTGAGGGTGGCCTTGTACTTGGCACAAGCACTAGAGTATTGCAGCAGTAAAGACCGGGCTTTGTATCATGATCTCAATGCTTACAGGATTTTGTTCGATCAGGACTGCAATCCAAGATTATCGTGCTTTGGCCTCATGAAGAATAGCAGGGATGGCAAGAGTTACAGTACAAACTTGGCATTCACTCCTCCAGAGTACATGAGAACTGGCAGAGTTACGCCAGAGAGTGTTGTTTACAGTTTTGGTACTCTATTGTTGGATCTTCTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGATCTCATTCGCGGAAAAAATTTTCTGATGTTGATGGATTCTGCTTTGGAGGGTCATTTTTCAAATGACGATGGTACTGAGTTGGTGCGGTTGGCTTCCCGTTGTTTACAGTATGAAGTTTGCGAAAGGCCAAATGCGAAGTCCCTTGTCAGTGCTCTCGTTTCGCTTCAGAAAGAGACAGAGGTTCCTTCATATGCTTTGATGGGAATACAGCGTGAAAATGCTTCCTCCGCAAAGCCATTGTCCTTAACACCTTTTGGTGAAGCTTGCTTGAGGGCGGATCTTACTGCTATACATGAAATATTAGAGAAGATAGGTTACAAAGATGATGAGGGCATTACCAATGAGCTTTCATTTCAGGTGTGGACTAATCAGATGCAGGAGACATTAAATTCCAAAAAGCAAGGAGACAGTGCCTTCCGAAATAAGGACTTCTCCAGTGCCATCAATTGCTACAGACAATTCATCGATGGGGGAACAATGGTATCGCCCACCGTGTATGCTAGGCGCTGCTTGTCTTATTTGATGAACGATATGCCTCAGGAAGCTCTGGGAGATGCTATGCAAGCGCAGGTGGTCTCTCCTGAATGGCCAACTGCTTTGTATCTCCAAGCAACTTGCCTCTTCAGTCTTGGAATGGAAAATGATGCACAAGAAACACTCAGAGATGCCACACACTTGGAAGCTAAAAAGAACAAAAACTGA 1476 0.4512 MGARCSKFSFCWFHSHLKQSVLESSDFENGGKSDQKLWPSFCEFSLDQLKVATNGFASDNIVSEHGEKAPNVVYKGQLSSGLWVAVKRFNKFAWPDSRQFLEEARSVGSLRSERLANLIGCCCEGDDRLLVAEFMSHETLAKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKDRALYHDLNAYRILFDQDCNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSNDDGTELVRLASRCLQYEVCERPNAKSLVSALVSLQKETEVPSYALMGIQRENASSAKPLSLTPFGEACLRADLTAIHEILEKIGYKDDEGITNELSFQVWTNQMQETLNSKKQGDSAFRNKDFSSAINCYRQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWPTALYLQATCLFSLGMENDAQETLRDATHLEAKKNKN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01325 491 Gene3D Tetratricopeptide repeat domain 380 491 IPR011990 GO:0005515
Pte7g01325 491 FunFam probable serine/threonine-protein kinase At4g35230 384 491 - -
Pte7g01325 491 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Pte7g01325 491 SUPERFAMILY TPR-like 390 485 IPR011990 GO:0005515
Pte7g01325 491 Gene3D Transferase(Phosphotransferase) domain 1 137 328 - -
Pte7g01325 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01325 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Pte7g01325 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 18 490 IPR045845 GO:0004672|GO:0009742
Pte7g01325 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Pte7g01325 491 SUPERFAMILY Protein kinase-like (PK-like) 33 319 IPR011009 -
Pte7g01325 491 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01325 Pte-Chr7 37607626 37609977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01325 44 310 Glycoside Hydrolase AT3G07070 34.915 9.06e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte7g01325 PK_Tyr_Ser-Thr 2.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01325 - - qsa:O6P43_016684 885.56