Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01313 ATGTGCAGTGTAGTCGTAGAAAGAATAATGAGTAGGGGACATGAAATTCTCTCACCATCCTCATATCTGGAGAACTCAGGTTGGTTGTTTCAGGAAAGCAAGGGAACCAAATGGACCCTCGAAGAGAACAAGTTATTTGAGAATGCCCTTGCTTTGTTTGATAAAGATACCCCTGATCGGTGGCTGAGGGTGGCAGCCATGATACCAGGGAAGACTGTAGGTGATGTTATCAAACAATACAGGGAGTTGGAGGAAGATGTTAGTGACATCGAAGCTGGATTGATTCCAATTCCTGGCTATGCTAGTAGTTCTTTCGCATTAGAGTGGGTTAATAATCAAGGATTTGCTGATTTGAAGCAATTATACGCTGTTGGTGGCAAAAGAGCTACTTCCACCAGGCCTTCTGAGCACGAAAGGAAGAAAGGAGTTCCATGGACGGAGGAGGAGCACAGGCAATTCTTAATAGGCCTGAAAAAGTATGGTAAAGGTGATTGGAGAAATATCTCTCGTAACTATGTGACTACTAGGACACCTACTCAGGTTGCTAGTCATGCTCAGAAATACTTTATCAGGCAGGTTATGGGAGGGAAGGATAAGAGGAGATCAAGTATTCATGATATCACTACAGTCAATCTCTTAGACCCTAAACCTCCTTCACCTGAGAGTAACAAGCTTCCGTCTTCTGATCATTCCATGAAAGTTTTGCAAACGCAGAAAAATCAAAAGGTTTCTGCGATTGTAAAAAATGACTATGATCATCACTTACCATATAAGGGAGCCGGTGTAACTTATAATCCATCAAACGGAAGTACAATTATGACACCGTTTTATGGAGTATTCTCAAATGAACCTAGGCTACAGGAACAATATCTTTCCAGAAGCACTCTACTTGGATCTCAGTGTGGAACTTATGATACCGGCTTTCAAATGCAGCATCACTGA 942 0.4204 MCSVVVERIMSRGHEILSPSSYLENSGWLFQESKGTKWTLEENKLFENALALFDKDTPDRWLRVAAMIPGKTVGDVIKQYRELEEDVSDIEAGLIPIPGYASSSFALEWVNNQGFADLKQLYAVGGKRATSTRPSEHERKKGVPWTEEEHRQFLIGLKKYGKGDWRNISRNYVTTRTPTQVASHAQKYFIRQVMGGKDKRRSSIHDITTVNLLDPKPPSPESNKLPSSDHSMKVLQTQKNQKVSAIVKNDYDHHLPYKGAGVTYNPSNGSTIMTPFYGVFSNEPRLQEQYLSRSTLLGSQCGTYDTGFQMQHH* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01313 313 ProSiteProfiles SANT domain profile. 145 193 IPR017884 -
Pte7g01313 313 SUPERFAMILY Homeodomain-like 36 90 IPR009057 -
Pte7g01313 313 Gene3D - 30 97 - -
Pte7g01313 313 Pfam Myb-like DNA-binding domain 144 189 IPR001005 -
Pte7g01313 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 193 IPR017930 -
Pte7g01313 313 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 32 243 IPR043363 -
Pte7g01313 313 FunFam transcription factor MYB1R1 143 194 - -
Pte7g01313 313 CDD SANT 37 83 IPR001005 -
Pte7g01313 313 SUPERFAMILY Homeodomain-like 139 192 IPR009057 -
Pte7g01313 313 SMART sant 141 191 IPR001005 -
Pte7g01313 313 SMART sant 34 86 IPR001005 -
Pte7g01313 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 140 192 IPR006447 GO:0003677
Pte7g01313 313 FunFam Transcription factor SRM1 30 97 - -
Pte7g01313 313 Gene3D - 143 193 - -
Pte7g01313 313 CDD SANT 144 189 IPR001005 -
Pte7g01313 313 ProSiteProfiles Myb-like domain profile. 137 189 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01313 Pte-Chr7 37518210 37519582 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte7g01313 Myb_DNA-binding 7.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01313 - - qsa:O6P43_026398 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g01313 7 37518210 37519582 Pte7g01313 7 37518210 37519582 RCT
Pte7g01313 7 37518210 37519582 Pte16g00858 16 27719514 27721323 RCT
Pte7g01313 7 37518210 37519582 Pte8g00734 8 30632508 30632936 RCT
Pte7g01313 7 37518210 37519582 Pte4g01183 4 42787754 42792016 RCT