Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01250 ATGGACGGAGGTGGACAGTACAATCCTCGCACTGTAGAAGAGGTTTTCAGAGATTTCAAGGGTCGAAGAGCTGGAATTATCAAAGCACTTACATCGGATGTTGAAGAATTCTATCAGCAATGCGATCCTGAGAAGGAAAACTTGTGCCTGTATGGATTCCCCAGTGAGCAATGGGAAGTCAATTTGCCAGCAGAGGAAGTTCCTCCGGAGCTTCCAGAGCCCGCATTGGGTATCAATTTTGCCAGAGATGGGATGCAGGAGAAGGATTGGTTGTCACTGGTTGCAGTGCACAGTGATGCATGGCTTCTTTCTGTTGCCTTCTATTTTGGAGCAAGATTTGGATTTGATAAGGCAGACAGGAAACGGCTTTTTAATATGATTAATGAAGTACCGACAATATTTGAAGTTGTGACTGGGTCTGCAAAGAAACAAACAAAAGAGAAGTCTTCAAATCACAGTGGAAGCAAACCCAAGTCCAACTCAAAAGCGAAGGGATCTGAAACTCAAGCAAGGAATACAAAAGCATCATCGCAACTGAAGGATGAAGATGAGGGAGTCGACGAAGATGAGGATGAGGAGCATGGAGAGACCTTGTGTGGGGCATGCGGTGAGCATTATGCTTCTGATGAATTCTGGATTTGTTGTGATATTTGTGAGAAGTGGTTCCATGGCAAATGTGTGAAGATAACCCCTGCAAGAGCTGAGCATATCAAGCAATACAAGTGCCCATCATGCAGCAACAAGAGGTCTCGTCCCTGA 759 0.4506 MDGGGQYNPRTVEEVFRDFKGRRAGIIKALTSDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKADRKRLFNMINEVPTIFEVVTGSAKKQTKEKSSNHSGSKPKSNSKAKGSETQARNTKASSQLKDEDEGVDEDEDEEHGETLCGACGEHYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRSRP* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01250 252 PANTHER CPG BINDING PROTEIN 8 251 IPR045104 GO:0006355|GO:0042393
Pte7g01250 252 ProSitePatterns Zinc finger PHD-type signature. 199 245 IPR019786 -
Pte7g01250 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 247 IPR013083 -
Pte7g01250 252 MobiDBLite consensus disorder prediction 154 175 - -
Pte7g01250 252 FunFam PHD finger alfin-like protein 191 247 - -
Pte7g01250 252 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Pte7g01250 252 MobiDBLite consensus disorder prediction 141 192 - -
Pte7g01250 252 CDD PHD_AL_plant 198 248 IPR044104 -
Pte7g01250 252 ProSiteProfiles Zinc finger PHD-type profile. 196 248 IPR019787 -
Pte7g01250 252 Pfam PHD-finger 199 248 IPR019787 -
Pte7g01250 252 SMART PHD_3 198 246 IPR001965 -
Pte7g01250 252 SUPERFAMILY FYVE/PHD zinc finger 188 250 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01250 Pte-Chr7 36811240 36815367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01250 1 253 Alfin-like Transcription Factor Family AT3G42790 75.197 1.41e-127 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Pte7g01250 Alfin 1.5e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01250 K26274 - csin:114296613 452.595