Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01249 ATGTTGACTTGTATAGCCTGTTCTAAGCAGCTCAACAATGGATCTCTTCATCAACAACGGGACGATGAAGCTGTTGGAACACCAAGTACAAAGCACACTGTCAAGGCTCTCACTTCTCAGATCAAGGATATGGCACTAAAAGCTTCAGGTGCATACAAGAACTGCAAATCTTGTTCAGGGTCGTCAAATAACAGTAAGAACAGAAACTATGGTGAGTCTGACACAGCATCAGATTCTGCAAGGTTTCACTGCCCGTATCGAAGAACTGGGAGCTCCAACTCTACACCTAGGATGTGGGGAAAAGAAATGGAAGCAAGGTTGAAAGGTCTTTCAAGCGGGGAGGGAATACCAGCATCGGTAAATGGACGTACTGAATCAATTGTCTTCATGGAGGAAGATGAGCCAAAGGAATGGGTAGCACAAGTTGAGCCTGGTGTGCTGATCACGTTTGTTTCATTGTCTCAAGGTGGGAATGATTTGAAACGTATTCGGTTCAGTCGTGAAATGTTCAATAAATGTCAAGCTCAGAGGTGGTGGCCAGAAAATTGTGAAAAAATCATGGAATTGTACAATGTTCATAGATTTAATCAACAAGGAGTTCCCATGCCAACTCCACCTAGATCTGAAGAAGAGGGCTCAAAGATTGAATCTGCTAGAGACAGTCCAGCCACTCCTCCTCTTAGCAGAGAACGCCTGCCACATCATGTCCATCATCCAACAGGAATGGGCTACTCTTCTTCAGACTCACTTGACCACCAGCCTATGCAATTCCGCCATTACTGTGATACTAGTGGTCTTGCTTCAACACCTAAACTATCTAGCATTAGTGGAGAAAAGACTGAGGCGTCTTCTGGAGATGGTTCAGTTAGGACCAGTTCATCACCGGAGGCTGATCAGTCGGGCGAGCTTTCAATCAGCAATGCCAGTGATATGGAGACCGAATGGGTAGAACAGGATGAGCCAGGTGTTTACATCACTATTAAGCAACTTCCCGGTGGAACTAGGGAGCTTAGACGTGTTCGGTTCAGCCGAGAACGATTTGGAGAAATGCATGCAAGGCTATGGTGGGAACAGAATCGTGCTAGGATACAGGAACAATATTTGTGA 1107 0.4544 MLTCIACSKQLNNGSLHQQRDDEAVGTPSTKHTVKALTSQIKDMALKASGAYKNCKSCSGSSNNSKNRNYGESDTASDSARFHCPYRRTGSSNSTPRMWGKEMEARLKGLSSGEGIPASVNGRTESIVFMEEDEPKEWVAQVEPGVLITFVSLSQGGNDLKRIRFSREMFNKCQAQRWWPENCEKIMELYNVHRFNQQGVPMPTPPRSEEEGSKIESARDSPATPPLSRERLPHHVHHPTGMGYSSSDSLDHQPMQFRHYCDTSGLASTPKLSSISGEKTEASSGDGSVRTSSSPEADQSGELSISNASDMETEWVEQDEPGVYITIKQLPGGTRELRRVRFSRERFGEMHARLWWEQNRARIQEQYL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01249 368 MobiDBLite consensus disorder prediction 197 251 - -
Pte7g01249 368 MobiDBLite consensus disorder prediction 268 309 - -
Pte7g01249 368 Pfam Transcription factor BRX N-terminal domain 23 58 IPR027988 -
Pte7g01249 368 MobiDBLite consensus disorder prediction 57 76 - -
Pte7g01249 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Pte7g01249 368 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
Pte7g01249 368 MobiDBLite consensus disorder prediction 57 97 - -
Pte7g01249 368 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
Pte7g01249 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Pte7g01249 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01249 Pte-Chr7 36804003 36808270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01249 1 369 Major Intrinsic Protein MIP AT1G31880 44.444 4.80e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01249 - - cave:132186704 600.512