Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01242 ATGTGTGGAGGGGCCATCATCTCCGACTATGTTCCACTTGTTAAAACGACTCGACGGTTGACCGCTGATTACCGATGGTCTGAAGATGGATCGAGCAATGAGTCCAACCCGTGGTCGAAGAAACCTCTTCCACGGAAACAGAATTCAAAGTTCATCGATGTTGATCAAGACTTCAAAGCTGACTTCTGGGATTTTGAAGATGATGACTTTGATAATGTTGTAGTGTTGAATAGCGATCCCTTTTCTCCCTCAATTTCAAAACCATCAAGGCGTCCATATGAACTGGAATCTCAGAAATTCAATGGAACGTCTGAGAAGGCTGAGAAATCTGCAAAGAGAAAGAGGAAGAACAGCAATGCGTACAAAGGGGTCCGGAAGCGACCATGGGGTAAATGGGCAGCAGAGATTCGAGATCCTAGAAAGGGTTGTCGAGTTTGGCTTGGAACATTTGGCAGTGCAGAGGAAGCTGCAAAGGCTTACGATAGTGAAGCTCTAAAGATACGAGGCGAAAAAGCTAAGGTGAACTTCCCTTATGACCAGACATCACAGTCTGGTACCAAACAAAAGTGTCCTACCTCTGAGATTCCTGCACAGGTAAATCAGAAGCCTGTTCGCAATGGAGAACATCGAAAGCTTTGCGCCATCAAAGTCCACGTAGATGATCAGATGGAGGAATTTACTCTTATGCATCCACCAGATGAGAAACCAAACGTTAATCTGTATGATGACATAGAAAACTTCCTTGGAATTGGATCATGCAGTGATCAAGAGACAAAACCCTCGAGTCTTTTATCTGATAATGGTTCCATTAGTTTAAGTTCAAATGATCAGGGGGCCGATTTCTTTGATATCTCAGACTTTGGTCGGAAAGCAGCATCTGGGACATGGGATGCTGCACTGAATAGCTTTCTTGGTGTGGATGATTATGTTGCGAATCAGGAGGGCGTGAACTTGACAGATCTTTGGACCTTTGATGTTGTTCTTCCCTAG 990 0.4434 MCGGAIISDYVPLVKTTRRLTADYRWSEDGSSNESNPWSKKPLPRKQNSKFIDVDQDFKADFWDFEDDDFDNVVVLNSDPFSPSISKPSRRPYELESQKFNGTSEKAEKSAKRKRKNSNAYKGVRKRPWGKWAAEIRDPRKGCRVWLGTFGSAEEAAKAYDSEALKIRGEKAKVNFPYDQTSQSGTKQKCPTSEIPAQVNQKPVRNGEHRKLCAIKVHVDDQMEEFTLMHPPDEKPNVNLYDDIENFLGIGSCSDQETKPSSLLSDNGSISLSSNDQGADFFDISDFGRKAASGTWDAALNSFLGVDDYVANQEGVNLTDLWTFDVVLP* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01242 329 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Pte7g01242 329 MobiDBLite consensus disorder prediction 26 43 - -
Pte7g01242 329 SUPERFAMILY DNA-binding domain 120 178 IPR016177 GO:0003677
Pte7g01242 329 MobiDBLite consensus disorder prediction 177 196 - -
Pte7g01242 329 Gene3D AP2/ERF domain 120 178 IPR036955 GO:0003700|GO:0006355
Pte7g01242 329 CDD AP2 121 179 IPR001471 GO:0003700|GO:0006355
Pte7g01242 329 Pfam AP2 domain 121 169 IPR001471 GO:0003700|GO:0006355
Pte7g01242 329 MobiDBLite consensus disorder prediction 81 124 - -
Pte7g01242 329 PANTHER DNA-BINDING DOMAIN 86 218 IPR044808 GO:0003700|GO:0009873
Pte7g01242 329 FunFam Ethylene-responsive transcription factor 2 119 178 - -
Pte7g01242 329 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Pte7g01242 329 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Pte7g01242 329 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Pte7g01242 329 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01242 Pte-Chr7 36750096 36751909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01242 1 177 AP2-EREBP Transcription Factor Family AT3G16770 44.693 4.48e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g01242 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01242 K09286 - fve:101291067 172.94