Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01241 ATGAGTAATTGGTTGGGCTTTTCTTTGACTCCACACTTGAGGATTGATGAAGCATTTGACAGAGAAAACCAAGAACACCATCTTCATCATCATCATCATCATGCTGACTTTTCTCCTCATTTGTTTGCCATGCCTTTGCGCTCTCTCTCCATGTCTAATTGCTTCAGGCGCTCCGATGGTTCTCCAGACTGGAGATATGAGGATACTCTTTCTACAACGAGTGAAGAAGGTCCAAAGCTAGAAGATTTCCTAGGTGGTTACTCAAACTCTCCCGCTGCTGAAACTAAAGTCTTTTCCGAAAGCTCACTGCAAGACCAAGACAATGAGAAGATCAGTACCATTCACAAGTTCAATGTTAATGCACCTGCAGGCTTCAGGTGTGCAAACACAGATGTAGAAAGTGAAGATGTTGTCACGAACCCATATTCTGTGCTACATACATTTCGCATCTATAATGGTCAGCCACAAGTGCCAATTCCTAGCAATGACATTTACAAGTCATGGTTGCGACAAACTCAGTTTGTTGATGGAGAATCAACTGGTGGAGCAAATGCTCAGTCACTGGCCCTCACCATGAGCCCCAACAATGTGCAAACTAGAGTAGTGAGTGATACTTCGTCTTTGGTAGTAGCTGACACTGACACGCGTAAAAGGTCGGTTAATAAATCGATCATTAGAGAACCAGTGCCTCGGAAATCCATAGATTCTTTTGGACAGAGAACATCTCAATATCGTGGTGTTACAAGACATAGGTGGACTGGGAGGTATGAGGCGCATCTATGGGATAACAGTTGCAGAAAGGAAGGCCAGACAATGAAAGGAAAGCAAGGTTGGGTTTTTGTGTGTGGTTATGATAAGGAACGAAAGGCAGCAAGGGCTTACGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACTTAAATTTCCCTTTAAGCACTTCTGAGAAAGAACTTGAAGAGATGAAACTCAGGAGCAGACAAGAATTTGTTGCCCACTTAAGGAGGAAAAGCAGTGGTTTTTCAAGAGGAGCATCCATGTATAGAGGACTATTAATGAACACAATTGTTTCCTTGCCCCTCGGACATCATCAACATGGAAGATGGCAAGCTAGGATTGGAAGAGTTGCAGGAAACAAAGACTTGTACCTCGGCACCTTTAGTACACAGGAAGAAACTGCCGAAGCATATGATATTGCAGCAATTAAGTTTAGGGGAACAAGTGCTGTGACCAACTTTGATATAAGTAGATATGATGGGAAGAGAATCTGCTCAAGCTCAACCCTTATTGCTGGTGATTTGGCTAAACGGTCACCAAAAGACTCTCTTTGTGGCTTCATTGAGGACTACAATTTTGGTGTTTCATCTTCATCCTCTCAACCCATTTTGTCATTGGCCAATGGTGAGAATGATGACATTGAAAATATGGTAGTCTGGACTAGCAATGGTGCAGACAATGATCAAAATATTGAGGACGGTAAAAATACCAATAGGGCAGGGGATCAGGTTGATCCCAGCAGCAGTAACTCATCAACCCCACGAAGTTCGAAGGATTAG 1557 0.4316 MSNWLGFSLTPHLRIDEAFDRENQEHHLHHHHHHADFSPHLFAMPLRSLSMSNCFRRSDGSPDWRYEDTLSTTSEEGPKLEDFLGGYSNSPAAETKVFSESSLQDQDNEKISTIHKFNVNAPAGFRCANTDVESEDVVTNPYSVLHTFRIYNGQPQVPIPSNDIYKSWLRQTQFVDGESTGGANAQSLALTMSPNNVQTRVVSDTSSLVVADTDTRKRSVNKSIIREPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTMKGKQGWVFVCGYDKERKAARAYDLAALKYWGPTTHLNFPLSTSEKELEEMKLRSRQEFVAHLRRKSSGFSRGASMYRGLLMNTIVSLPLGHHQHGRWQARIGRVAGNKDLYLGTFSTQEETAEAYDIAAIKFRGTSAVTNFDISRYDGKRICSSSTLIAGDLAKRSPKDSLCGFIEDYNFGVSSSSSQPILSLANGENDDIENMVVWTSNGADNDQNIEDGKNTNRAGDQVDPSSSNSSTPRSSKD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01241 518 ProSiteProfiles AP2/ERF domain profile. 243 311 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 SUPERFAMILY DNA-binding domain 242 313 IPR016177 GO:0003677
Pte7g01241 518 MobiDBLite consensus disorder prediction 499 518 - -
Pte7g01241 518 ProSiteProfiles AP2/ERF domain profile. 347 414 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 FunFam AP2-like ethylene-responsive transcription factor ANT 242 313 - -
Pte7g01241 518 Pfam AP2 domain 243 303 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 CDD AP2 364 416 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 CDD AP2 242 313 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 MobiDBLite consensus disorder prediction 482 518 - -
Pte7g01241 518 Gene3D AP2/ERF domain 242 313 IPR036955 GO:0003700|GO:0006355
Pte7g01241 518 Gene3D AP2/ERF domain 357 416 IPR036955 GO:0003700|GO:0006355
Pte7g01241 518 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 75 441 - -
Pte7g01241 518 PRINTS Ethylene responsive element binding protein signature 293 313 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 PRINTS Ethylene responsive element binding protein signature 244 255 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 SMART rav1_2 243 317 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 SMART rav1_2 363 420 IPR001471 GO:0003700|GO:0006355
Pte7g01241 518 SUPERFAMILY DNA-binding domain 363 416 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01241 Pte-Chr7 36746076 36748875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01241 1 445 AP2-EREBP Transcription Factor Family AT1G72570 48.842 3.43e-126 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g01241 AP2 9.9e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01241 K09285 - gmx:100809762 570.852