Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01234 ATGTTTTTCAAAAAGCTGTCACTGAAATCCATTACACCCAGTTGCTTGAAGGCGAAACATTTGTCTTTGGAACCAAAACCAAAAAGAGAATGTCCGAAGAAGACGTCACGTAGGATATCTCTATCTGACCTGAGTGATACATCAAAGCTGTGTATTGTGGGTGATTTACCTAATTCTGTTCTGGGGTCAAATCTTCATACATTTTCTCTCAAGGAGCTGAAGGACATCACTCAGAGCTTCTCGGAAAGTAATTTTCTAGGTGAAGGTGGGTTTGGAAGAGTGTATAAAGGATTCATTGATGACAAGCTTAGGCATGGTTTGGAAGCTCAACTTGTAGCTGTTAAGGTCCTAGACTTGGACGGCAAACAAGGACACAAAGAGTGGCTGGCTGAAGTAATATTTCTTGGACAATTAAAGCACCCTCATCTTGTAAACTTGATTGGATGTTGCTGTGAAGATGAACACAGACTGCTTGTGTATGAATACATGGACCGGGGTAACTTGGATATCAAGCTCTTTAGCGATTACACAGCAACCTTGCCATGGTTAACAAGACTCAAAATAGCGATTGGAGCTGCTAAAGGCCTTGGATTCCTTCATGAAGAAGAACAACCAGTCATCTATAGAGATGTCAAACCTTCAAATATATTGCTGGATACAGATTACAATGCTAAGCTCTCTGATTTTGGGCTTGCAACGGATGGTTCCGAAGGAGAAGAGTCCCATGTCAGCACAAAAGTAGTTGGCACCCATGGCTACGCAGCTCCTGAATATATCATGACAGGTCATCTGACGACTATGAGTGATGTATTCAGTTTTGGGATAGTCCTTCTAGAAATGCTAACAGGAAGACGTTCGGTTGAGAAAAATCGGCCAACAAGAGAGCAGAATTTGGTAGAGTGGGCAAGACCTATGTTGAAGGACCCCCGCAAACTGGATAGGATTATAGACCCCAGACTTGAAGGTAAGTACTCCACAGAAGCGGCTAGAAAGGCAGCTCTAGTAGCTCATCAATGTCTAAGTCGTCATCCAAAATCAAGACCTAGTATGACAACAGTGGTGAAGACCTTAGAGCCTCTCGTGGAGTTGAATGAAATCCCAGTGGTCGAGCACTAA 1116 0.4301 MFFKKLSLKSITPSCLKAKHLSLEPKPKRECPKKTSRRISLSDLSDTSKLCIVGDLPNSVLGSNLHTFSLKELKDITQSFSESNFLGEGGFGRVYKGFIDDKLRHGLEAQLVAVKVLDLDGKQGHKEWLAEVIFLGQLKHPHLVNLIGCCCEDEHRLLVYEYMDRGNLDIKLFSDYTATLPWLTRLKIAIGAAKGLGFLHEEEQPVIYRDVKPSNILLDTDYNAKLSDFGLATDGSEGEESHVSTKVVGTHGYAAPEYIMTGHLTTMSDVFSFGIVLLEMLTGRRSVEKNRPTREQNLVEWARPMLKDPRKLDRIIDPRLEGKYSTEAARKAALVAHQCLSRHPKSRPSMTTVVKTLEPLVELNEIPVVEH* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01234 371 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Pte7g01234 371 Pfam Protein kinase domain 81 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01234 371 SMART serkin_6 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01234 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pte7g01234 371 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01234 371 CDD STKc_IRAK 86 360 - -
Pte7g01234 371 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 163 367 - -
Pte7g01234 371 Gene3D Phosphorylase Kinase; domain 1 51 162 - -
Pte7g01234 371 PANTHER OS01G0588500 PROTEIN-RELATED 41 360 - -
Pte7g01234 371 ProSitePatterns Protein kinases ATP-binding region signature. 86 115 IPR017441 GO:0005524
Pte7g01234 371 FunFam Serine/threonine-protein kinase BIK1 52 162 - -
Pte7g01234 371 Gene3D Transferase(Phosphotransferase) domain 1 163 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01234 Pte-Chr7 36680905 36714044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01234 66 357 Glycoside Hydrolase AT3G07070 51.525 1.58e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte7g01234 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01234 - - qsa:O6P43_027541 563.533