Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01228 ATGGATGATTCTCCTAAAAATGTTGATTTTGCGTTTGATAAAGCTGAGAAGATAATACTGAGGTGGGACTCAACTGTTTCTGAGGAAGCCAGAGAAAAGATGATTTTTGATGGTGATCGTCAAGAGGTTGATCTCTACTTACAAGCCGTTGATGACATCCAAAAATCTATCTCTTCAACTCGAATCTCCGTCGACGAACAGAGCAAAGTCAACACAGCTATACAGATCGCCATGGCACGCCTCGAAGACGAGTTTCGCAATATACTTATCACTCATACTAATCCCATTGAAGCTGATTCTCTTATTGATCCTAGCTCATCTTTTCAGTCTTCCTCTTCCAGAACGGGTGGAGTAGCTGAGTTTGAAGATGAGGCTAATGGAGAAGATGAAGGAGATAGTCCTACTTCTTTGCTCAAAAATGAAGGATTACTTCGTCATAGTAGTAGTGGGGTTTCAAGTGCTGCTAGTGGAAGCTACCGATCCACTAGTAGTATTCGTGAGATCGATCTGTTACCTTGTGAAGCCATTGATGACCTTAGGAACATAGCTGAGAGAATGATCTCATCTGGGTATTTAAGGGAGTGCATCCAAGTGTATGGTAGTGTGAGAAAATCAGCAGTGGATTCTGGCTTCAGGAGACTTGGGGTTGAGAAGCTGAGCATAGGGGATATTCAGAGGTTGGAGTGGGACCAACTTGAAGCAAAGATTAGAAGGTGGATAAGGGCTGCCAAGGTTTGTGTGAGGACATTGTTTTCAAGTGAGAAGAAGCTCTGTGAGCAAATCTTCGATGGGGTCGGTACCGCTATTGATGATGCCTGCTTTATGGAAACAGTCAAAGGTCCAGCTATTCAGCTGTTCAATTTTGCTGAGGCAATTAGTATAAGCAGGCGATCACCTGAGAAGTTGTTCAAAATTTTGGACCTTCATGATGCTTTGATGGATTTAATACCAGATATTGATGCTGTGTTTCAGTCAAAATCTTCAGAATCCATTCGAATTCAGGCAGCTGAGATACTCTCTCGGCTAGCAGAAGCAGCTAGAGGAATATTGTCAGAGTTTGAGAGCGCTGTGCTTCGTGAACCATCGAAAGTTCCGGTGCCAGGTGGTACAATTCACCCTTTGACTAGGTATGTGATGAATTATATAAGTTTAATCTCTGATTACAAGCAAACCATGAATGAGCTTATTGTGTCAAAACCATCAACGGGGTCAAGGTATTCTGGTGACCCGACTACCCCAGATATGGATTTCAGTGAACTGGAAGGGAAAACGCCATTGGCTATTCACTTGATTTGGATTATTGTGATACTGCAATTCAATTTAGATGGTAAGTGTAAGCATTATAAAGATGCATCTTTGTCTCATTTGTTTATGATGAATAATGTTCACTACATTGCTCAAAAGATAAAAGGGTCTCCTGAACTGCGGGAGATGATTGGGGATGATTACTTAAGGAAGCTTACAGGGAAATTCCGGCAGGCTGCGACAAGCTATCAGAGAGCGACTTGGGTGAGGGTATTGTATTGCTTGAGAGATGAGGGACTGCATGTAAGCGGGGGTTTCTCCTCTGGTGTCTCAAAGAGTGCTTTGAGAGAAAGATTTAAGGCCTTCAATGCTATGTTTGAAGAGGTGCATAGGACTCAAGCAATTTGGTTGATTCCTGATACTCAGCTCAGAGAGGAGCTCCGCATATCTATATCAGAGAAAGTGATCCCTGCATATAGATCGTTTCTTGGACGATTTAGGAGCCACATAGAGAGCGGAAAGCACCCAGAGAATTACATTAAGTACTCAGTTGAAGATTTGGAGAATGCTGTCTTGGACTTCTTTGAAGGTTGCCCTATCTCTCAGCACCTTAGGAGAAGATCTGAATGA 1875 0.4267 MDDSPKNVDFAFDKAEKIILRWDSTVSEEAREKMIFDGDRQEVDLYLQAVDDIQKSISSTRISVDEQSKVNTAIQIAMARLEDEFRNILITHTNPIEADSLIDPSSSFQSSSSRTGGVAEFEDEANGEDEGDSPTSLLKNEGLLRHSSSGVSSAASGSYRSTSSIREIDLLPCEAIDDLRNIAERMISSGYLRECIQVYGSVRKSAVDSGFRRLGVEKLSIGDIQRLEWDQLEAKIRRWIRAAKVCVRTLFSSEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDAVFQSKSSESIRIQAAEILSRLAEAARGILSEFESAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTMNELIVSKPSTGSRYSGDPTTPDMDFSELEGKTPLAIHLIWIIVILQFNLDGKCKHYKDASLSHLFMMNNVHYIAQKIKGSPELREMIGDDYLRKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAIWLIPDTQLREELRISISEKVIPAYRSFLGRFRSHIESGKHPENYIKYSVEDLENAVLDFFEGCPISQHLRRRSE* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01228 624 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 612 IPR004140 GO:0000145|GO:0006887
Pte7g01228 624 Pfam Exo70 exocyst complex subunit 238 606 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte7g01228 624 MobiDBLite consensus disorder prediction 100 117 - -
Pte7g01228 624 Gene3D Exocyst complex component Exo70 18 131 - -
Pte7g01228 624 Gene3D Exocyst complex component Exo70 133 620 - -
Pte7g01228 624 MobiDBLite consensus disorder prediction 100 138 - -
Pte7g01228 624 SUPERFAMILY Cullin repeat-like 13 611 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01228 Pte-Chr7 36632018 36633892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01228 11 625 EXO70 exocyst subunit family AT1G72470 71.129 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01228 K07195 - qsa:O6P43_018425 1014.22