Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01219 ATGGCTACTAATCAAACTACTCCACCACGCCAGCTATCGCAGAAGGAGGCAGACATTCAGATGATGCTGGCTGCCGAATGTCATCTGGGTACCAAGAACTGTGACTTCCAAATGGAGCGTTATGTATTCAAGCGCCGTAATGATGGTATCTATATTATTAATCTTGGGAAGACATGGGAAAAGCTCCAACTTGCTGCTAGAGTGATTGTTGCAATTGAAAATCCCCAGGACATTATTGTTCAGTCAGCAAGACCTTATGGTCAGAGAGCAGTCCTGAAGTTTGCTCAATACACTGGTTGTCATGCCATCGCTGGAAGGCATACCCCTGGTACCTTCACAAATCAGTTGCAGACTTCCTTCAGTGAGCCTAGGCTGCTGATCTTGACTGACCCTAGAACTGATCACCAGCCAATTAAGGAAGCTGCACTCGGAAACATTCCCACTATTGCTTTCTGTGATACTGATTCTCCAATGCGGTATGTTGATATTGGGATACCATCTAATAACAAGGGCAGGCACAGTATTGGATGTCTCTTCTGGTTGTTGGCAAGAATGGTTCTTCAAATGCGGGGTATCATTCGTGCTGGTCAAAAGTGGGACGTGATGGTCGATTTATTTTTCTATAGAGAGCCTGAGGAGGCCAAGCAGCAAGAGGAAGAACAAGCGGCTCCTATTCAAGACTATGTCACTGACTTTGGTGCTACTGCAGTTTTGGATGGACAATGGGGTGCTCCGGGCGATGCCCAATGGCCTGAGGCAGTACCACAAATTCCAGTTGCTCCTGCTACTGGTTGGGCCCCAGAGCAATCCGCCGCAGGAGACTGGGAGGCAGTTGCACCTCCTGCACAAATTGCTGCACCATCGGAACCTGTTGGTAATTGGGAATGA 888 0.4797 MATNQTTPPRQLSQKEADIQMMLAAECHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGCHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPSNNKGRHSIGCLFWLLARMVLQMRGIIRAGQKWDVMVDLFFYREPEEAKQQEEEQAAPIQDYVTDFGATAVLDGQWGAPGDAQWPEAVPQIPVAPATGWAPEQSAAGDWEAVAPPAQIAAPSEPVGNWE* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01219 295 Gene3D - 18 224 - -
Pte7g01219 295 PANTHER 40S RIBOSOMAL PROTEIN SA 8 284 IPR005707 GO:0003735|GO:0006412|GO:0015935
Pte7g01219 295 MobiDBLite consensus disorder prediction 261 295 - -
Pte7g01219 295 FunFam 40S ribosomal protein SA 18 224 - -
Pte7g01219 295 CDD RPS2 22 188 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 PRINTS Ribosomal protein S2 signature 161 175 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 PRINTS Ribosomal protein S2 signature 123 140 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 PRINTS Ribosomal protein S2 signature 49 58 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 PRINTS Ribosomal protein S2 signature 19 37 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 PRINTS Ribosomal protein S2 signature 98 115 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 PRINTS Ribosomal protein S2 signature 140 151 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 SUPERFAMILY Ribosomal protein S2 14 204 IPR023591 -
Pte7g01219 295 Hamap 40S ribosomal protein SA [rps-0]. 6 278 IPR027498 GO:0003735|GO:0006412|GO:0015935
Pte7g01219 295 NCBIfam 30S ribosomal protein S2 14 210 IPR005707 GO:0003735|GO:0006412|GO:0015935
Pte7g01219 295 ProSitePatterns Ribosomal protein S2 signature 2. 123 147 IPR018130 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 Pfam Ribosomal protein S2 121 186 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pte7g01219 295 Pfam Ribosomal protein S2 22 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01219 Pte-Chr7 36569669 36572040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01219 1 282 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 74.126 8.05e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01219 K02998 - qsa:O6P43_027496 467.618