Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01213 ATGTTCCTCTCTCAAGGAGGTTTCAAACAAACTTGTACACTCCTTGCTGTTACCTGTGGAAGAAGTTCTGCAAATGAATTTGAAAAGGATGCTCAGAAGGATCAAAGCAAGTATCCTTTTCCTGAGTTGATTTCCTCTGGACGGTTGGAGGTTCGAACACTGAACAATCCCGAAAAAGAGCAGGTCTGTAAGACGCTTGAATCATTTCGACCAAATATTGTGTACTTCCAGGGTAAAAGACTTGAGAATGGAGACGTTGGGCCACTAATCTTGCAAGGCTCGGACTTCTCCAACTGCGAAGCTTTTCTGGAGCTATTGGGTACCAAATTGCCGACAGCTGTTTATTTGGACATTCCAAATGGTGAGAATTTAGCGCAGGCTCTTCACTATAAGGGAGTCCCTTATGTTATATATTGGAAGAATACTTTTTCCTATTACACAGCTTCCCACTTCCGTCATGCATTTCTTTCAGTGGTCCAGAGTTCACCCACTCATACATGGGATGCCTTTCAACTTGCTCGTGCTTCCTTTAAGATATATTGTGTGCAAAAGAATGGTGACTGTCCTGGTAACAATGTCCTAGTTAGAGATGAGATGGAGCCACATCTTCTTGGAGATCATCCAAAAATAAATGTGGAACCTCCAGCCGTAGATGAAGGGGAAGAACAAGAAGGTTCTACTGGTGCACTTTCTGCTGTAAAGATACATGATGAAGATGTGAGTTCAAGATTTCTTGTTTGCGGTCCACCAAGAAATGTGGATGCATCATTGTTAAGATATTTAGAGGATGGACTTCGCGCTCTATTGACCATAGAGATACGTGCAAGCAAACTTCAAGGCAAGTATAGTGCTGCACCGCCTCCCTTACAGGCAGCTTCATTTTCTCGTGGTGTTGTTACAATGCGATGTGATCTGTTGACTAGTAGTTCCGCACATATTTCTTTCTTAGTGTCAGGAAGTGCCCAAACTTGCTTCGATGATCAGCTCTTGGAGAATCATATCAAGAATGAGATAATTGAGAGGAATCCACTGGTTCATGTTGTACCTGAAAATGAGGAATACAAATCTCCCTTTTCTGAACCCAGGAAATCCATTTCTATTGCTTGTGGTGCATCGATCTTTGAAGTTTGCTTGAAGCTTCCTCAGTGGGCTTTTCAGGTTCTAAGACAGCTGGCACCTGATGTTGCATTCCGGAGTCTTGTTGCTCTTGGTATTGCAAGCATTCAAGGATTGCCTGTTGCTGCTTTTGAGAAAGATGATGCTGAGCGCCTGCTTTTCTTCTGTGAAAGGGATGGGGAGTTTTTATCTGCAAAGTGTTTGACTGTTGGTACTGCACCAAGTTGGTTTCGACCACCCCCTCCTACTAAGAAAAGGTGTGAAAGAAGTGAAGATACAACCAATGGATATCACGATAATGCAACTACTAGAGATTTGAAGACTGCTTCTCCATTAGCAGAAGGGGACGGAAAGAAGAATAGGACTCCATTGGTTCCTGTGAGGCAAAGATTAAAAGTATCTGCAATGAGGCCCATTCCTCATATTCATCGTCTTAATATGAAACCATTTTCTGGGATATCTGATGCTGTTGGATATGATAGCAAACAAGTTAAGATCAACTTACCAATTGTTGCTCCCACAAAGCACACCACTATTGGATCAGCCTCTGCAACACAACAAAAACCATATTCAAGCTCCCAGTCTAAGCAGGCTATCCCATTAAATCCACTCCCATTGAAGAAACATGGCTGTGACAGGGCCCCAATACAAGCTTGCTCTGAGGAGGAGTTCCTGAGAGATGTTGTCCAATTTCTAGTTGTACGAGGACATACTAGACTTATTCCTCAAGGTGGGCTTGCTGAGTTCCCTGATGCTATTCTCAATGGGACACGTCTTGACCTCTACAACTTGTATAATGAGGTTGTCACCCGGGGAGGTTTTCATGTAGGAAATGGCATCAACTGGAAAGGACAAATCTTCTCGAAGATGCGAAATTATACTATGACAAATAGAATGACTGGTGTAGGGAACACACTTAAACGACATTATGAAACTTACCTTCTAGAATATGAGTTAGCGCATGATGATGTCGGTGGTGAATGCTGCTTGTTGTGCCACAGTAGTGCACCGGGAGATTGGGTAAACTGTGGCATTTGTGGTGAGTGGGCTCATTTTGGCTGTGACAGAAGGCAAGGTCTTGGAGCATTTAAGGATTATGCGAAAACCGACGGGCTAGAGTACACATGCCCTCACTGTAGTGCTACAAATTTCAAAAAGAAAAATACTACTGCTAATGGATAA 2298 0.4299 MFLSQGGFKQTCTLLAVTCGRSSANEFEKDAQKDQSKYPFPELISSGRLEVRTLNNPEKEQVCKTLESFRPNIVYFQGKRLENGDVGPLILQGSDFSNCEAFLELLGTKLPTAVYLDIPNGENLAQALHYKGVPYVIYWKNTFSYYTASHFRHAFLSVVQSSPTHTWDAFQLARASFKIYCVQKNGDCPGNNVLVRDEMEPHLLGDHPKINVEPPAVDEGEEQEGSTGALSAVKIHDEDVSSRFLVCGPPRNVDASLLRYLEDGLRALLTIEIRASKLQGKYSAAPPPLQAASFSRGVVTMRCDLLTSSSAHISFLVSGSAQTCFDDQLLENHIKNEIIERNPLVHVVPENEEYKSPFSEPRKSISIACGASIFEVCLKLPQWAFQVLRQLAPDVAFRSLVALGIASIQGLPVAAFEKDDAERLLFFCERDGEFLSAKCLTVGTAPSWFRPPPPTKKRCERSEDTTNGYHDNATTRDLKTASPLAEGDGKKNRTPLVPVRQRLKVSAMRPIPHIHRLNMKPFSGISDAVGYDSKQVKINLPIVAPTKHTTIGSASATQQKPYSSSQSKQAIPLNPLPLKKHGCDRAPIQACSEEEFLRDVVQFLVVRGHTRLIPQGGLAEFPDAILNGTRLDLYNLYNEVVTRGGFHVGNGINWKGQIFSKMRNYTMTNRMTGVGNTLKRHYETYLLEYELAHDDVGGECCLLCHSSAPGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYTCPHCSATNFKKKNTTANG* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01213 765 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 762 IPR042293 -
Pte7g01213 765 MobiDBLite consensus disorder prediction 451 493 - -
Pte7g01213 765 Gene3D - 585 699 IPR036431 GO:0003677
Pte7g01213 765 Pfam ARID/BRIGHT DNA binding domain 593 690 IPR001606 GO:0003677
Pte7g01213 765 SUPERFAMILY FYVE/PHD zinc finger 692 758 IPR011011 -
Pte7g01213 765 MobiDBLite consensus disorder prediction 551 576 - -
Pte7g01213 765 SUPERFAMILY ARID-like 591 706 IPR036431 GO:0003677
Pte7g01213 765 CDD PHD_ARID4_like 700 751 - -
Pte7g01213 765 ProSiteProfiles ARID domain profile. 590 694 IPR001606 GO:0003677
Pte7g01213 765 SMART ARID_2 587 690 - -
Pte7g01213 765 MobiDBLite consensus disorder prediction 551 572 - -
Pte7g01213 765 CDD ARID 592 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01213 Pte-Chr7 36515636 36524137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01213 1 765 ARID Transcription Factor Family AT3G43240 58.085 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pte7g01213 ARID 2.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01213 - - jre:108982875 1082.01