Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01210 ATGGATTCGATCAAGTCATTCAAGGGCTATGGTAAGGTAGATGAGCTTGAGCAGCAGGCGTTCAAGAAGAAGACACGTAAGCGCATCGTCACTGTTATCATCTCCTCCATTGTACTACTTCTGGTGGTCGTCGCTGCAGTGGTAGGAATCGTCGTACACAAGCGCAACAGCTCATCCGACTCGGCTAATTCGATTCCATCCACTGAGTTGACACCATCAGCGTCACTCAAAACAGTATGTGAAGTGACTCAGTACCCTAAATCCTGCTTTGCTAGCATCTCCTCCGTCCCAAGCTCCAACACCACCGATCCACAACTCCTGTTCAAGCTTTCTCTGAAAGTTGCCATGGATGAGCTTTCCAAGATTACCGACTACCCGTCCAAGCTCGCAGCGAAAACAAACGACGTTCATATCAAATCTGCCATCTCTGTATGCCAAACTGTGCTCGATGACGCTTTGGACAGACTCAACGAATCCATTTCTTCCATGGAGGTGACTCAAGGTGAAAATGGGAAGCTCTCACTTTCCAAAATCAAAGATATGGAAACTTGGCTCAGCACCACTCTTACTGACCAAGAAACATGCTTGGAAGCTTTCAAAGAGTTGAACTCTTCCTCTACAAGTGACTTCGTTTATGGTCTGAAAACTGCTATGGAGAATTCTACTGAATTTGCAAGCAACAGTTTAGCCATTGTTACTAAAGTTCTAGGTTTGTTCACTGAGTTCAATATCCCTATCCATCGAAAGCTACTCGGGTTTGGAGGAACCGATTCGAAATTCCCTGAATGGGTTGGTCCGGTTGAGAGAAGATTGCTACTGGAGAATACCACTTCTTCTAAAGATGTGCATGTGACAGTGGCTAAGGATGGCAGCGGTAACTATCGAACTATCAAGGAGGCTGTGGCATTGGTGCCTAAGAAGAGTGACACAAGGTACGTGATCTATGTGAAAGAAGGCAAGTATGAAGAGAATGTGGTTTTGGATAAGAACAAGTGGAATGTGATGCTAGTGGGTGATAGCATGGACAAGACCATTATCTCAGGAAGCTTGAATTTTGTGGATGGCACACCAACTTTTGCCACTGCTACTTTTGCCGTTGCAGGAAAAGGATTCATAGCAAAAGACATTGCATTTGAAAACACAGCAGGTGCAGCAAAACACCAGGCTGTGGCGTTCAGGTCAGGCTCCGACCGATCCGTCTACTACCGATGCAAATTCAATGCCTACCAGGACACTCTCTACGCTCACTCGAACCGACAGTTCTACAGAGAATGTGACATAACTGGTACCATAGACTTCATTTTTGGCAATGCAGCCGTTGTCTTCCAAAAGTGTAACATCATGCCTAGACAACCACTACCAAACCAGTTCAACACCATTACCGCCCAAGGCAAGAAGGACCCGAATCAAAACACTGGCATTTCAATTCAAAACTGCAAGTTGGCCCCACTAGATCATTTTATCGCGCCAACCTATCTTGGTAGACCATGGCAACCGTACTCCACCACTGTGATCATGCAATCTGACATGGGTTCATTTTTGCACCCATTGGGTTGGGTAGCTTGGGTCCGGGACGTAGATCCACCCACGACAATATTCTATGCAGAGTATCAGAATACTGGACCCGGGTCATCTGTAACAGGCCGAGTTAAATGGGCTGGATATAGGTCCACTCTCTCTGACACTGAGGCTGCGAAGTTTACTGTGGACTCATTGATCCAGGGTGGTGATTGGTTGGCGGCTTCACAAGTGACTTATGACAATGCCTTGTGA 1773 0.4636 MDSIKSFKGYGKVDELEQQAFKKKTRKRIVTVIISSIVLLLVVVAAVVGIVVHKRNSSSDSANSIPSTELTPSASLKTVCEVTQYPKSCFASISSVPSSNTTDPQLLFKLSLKVAMDELSKITDYPSKLAAKTNDVHIKSAISVCQTVLDDALDRLNESISSMEVTQGENGKLSLSKIKDMETWLSTTLTDQETCLEAFKELNSSSTSDFVYGLKTAMENSTEFASNSLAIVTKVLGLFTEFNIPIHRKLLGFGGTDSKFPEWVGPVERRLLLENTTSSKDVHVTVAKDGSGNYRTIKEAVALVPKKSDTRYVIYVKEGKYEENVVLDKNKWNVMLVGDSMDKTIISGSLNFVDGTPTFATATFAVAGKGFIAKDIAFENTAGAAKHQAVAFRSGSDRSVYYRCKFNAYQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQKCNIMPRQPLPNQFNTITAQGKKDPNQNTGISIQNCKLAPLDHFIAPTYLGRPWQPYSTTVIMQSDMGSFLHPLGWVAWVRDVDPPTTIFYAEYQNTGPGSSVTGRVKWAGYRSTLSDTEAAKFTVDSLIQGGDWLAASQVTYDNAL* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01210 590 FunFam Pectinesterase 277 590 - -
Pte7g01210 590 FunFam Pectinesterase 72 236 - -
Pte7g01210 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 235 IPR035513 -
Pte7g01210 590 Gene3D - 278 590 IPR012334 -
Pte7g01210 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 235 IPR035513 -
Pte7g01210 590 Pfam Plant invertase/pectin methylesterase inhibitor 76 231 IPR006501 GO:0004857
Pte7g01210 590 PANTHER PECTINESTERASE 37 580 - -
Pte7g01210 590 ProSitePatterns Pectinesterase signature 2. 427 436 IPR033131 -
Pte7g01210 590 NCBIfam pectinesterase inhibitor domain 64 234 IPR006501 GO:0004857
Pte7g01210 590 SUPERFAMILY Pectin lyase-like 281 586 IPR011050 -
Pte7g01210 590 SMART PMEI_2 71 231 IPR006501 GO:0004857
Pte7g01210 590 Pfam Pectinesterase 283 575 IPR000070 GO:0030599|GO:0042545
Pte7g01210 590 CDD PMEI-like_3 78 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01210 Pte-Chr7 36483578 36486936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01210 1 584 Carbohydrate Esterase AT1G53840 59.797 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01210 - - qsa:O6P43_018474 840.106