Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01206 ATGAAATCCCCTGTCAAATTTTGCTTCATATTAGCTATTTTTAATCTTTCAGACATATATTCAACTGGGCGTTTAGCATTTTTACGAGTAAATTCTTCTTACAGGAAGTTCTCGAAGCTAAGTGAATTGAAGCAGGTGCTTTGTAAAAAAAAAAAAGGTGGGTTAGGGCCGATGGGTGACTCAAATGACAGTCCTGCTATAGTGTTATCAGGAAAGATTATGGTAGCTGCTGTAATAGTACTATTTTTGGTGGTTGTGTTGATTCTTTGTTTGCATCTCTATGCCAAATGGTTCTGGTGGCATCTTGATGAAGCCAATCGTGATCCTTTTCAAGGCCGTAGCCACCGACGCAGACGCAGGTTTGTCTTCAACCCAGGTCAGGACCTTGCTGTCGCCACTATTCATGGAAGAGGGCTTGACCCTGCTATCCTCAAGTCCATACCTGTGTTGGTATACAACCTAGTTGAGTTCAAAGACGGTTTGGAATGTGCTGTTTGCCTCTCTGAGCTTGAAAATGGGGAAAAGGCAAGGCTCCTACCTAAATGCAATCATGGGTTTCATGTTGATTGCATTGACATGTGGTTTCAATCACATTCTACCTGCCCACTTTGTAGGAATCCAGTTGCACCTGCACCTTCGCATTCTTCTGCTTTTACAGGTGCTTTTGTTGGGGCACAGAATGTCCAGATTGAAGAAGATAATTTGGCTTCTGAATCACCCATTTTCCCTACAAATGTATTAGTTTGGGGCAACCAAACTCAGGTGAGTTCTATTGGTGCTTGTCTAGAGGAGGGCCCTTCTTCCCAACACACTGGTGCCTCTTCTTCATCTCCAACTTCAATATCACTGGGTAATACTGTTAGGCCTCATGGAATGCTGGTGCTTGATATATCAGGTGAGATTATCAATCCACCGTCTTCATCCTCTTCTACCGCGGCTAGATTTGCTGATGATGAGCTCAAATCACCAATGACAACTAGACTTAGGTCATTGAAAAGGCTATTGAGTAGAGATAAGAGATCGGGTCCTTGTAGTCCTACTTCTGTGAATCTGGAACAAGTGATGAGGGGACAGAACTAG 1080 0.4324 MKSPVKFCFILAIFNLSDIYSTGRLAFLRVNSSYRKFSKLSELKQVLCKKKKGGLGPMGDSNDSPAIVLSGKIMVAAVIVLFLVVVLILCLHLYAKWFWWHLDEANRDPFQGRSHRRRRRFVFNPGQDLAVATIHGRGLDPAILKSIPVLVYNLVEFKDGLECAVCLSELENGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVAPAPSHSSAFTGAFVGAQNVQIEEDNLASESPIFPTNVLVWGNQTQVSSIGACLEEGPSSQHTGASSSSPTSISLGNTVRPHGMLVLDISGEIINPPSSSSSTAARFADDELKSPMTTRLRSLKRLLSRDKRSGPCSPTSVNLEQVMRGQN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01206 359 Pfam Ring finger domain 162 205 IPR001841 -
Pte7g01206 359 ProSiteProfiles Zinc finger RING-type profile. 163 205 IPR001841 -
Pte7g01206 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 209 IPR013083 -
Pte7g01206 359 SMART ring_2 163 204 IPR001841 -
Pte7g01206 359 MobiDBLite consensus disorder prediction 262 285 - -
Pte7g01206 359 SUPERFAMILY RING/U-box 143 211 - -
Pte7g01206 359 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 63 213 IPR044675 -
Pte7g01206 359 CDD RING-H2_EL5-like 162 205 - -
Pte7g01206 359 FunFam RING-H2 finger protein ATL3 130 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01206 Pte-Chr7 36465770 36467159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01206 71 339 C3H Transcription Factor Family AT1G53820 42.321 2.25e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01206 - - qsa:O6P43_027473 328.176