Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01191 ATGGAGATGATGGAAGAATCAAAAGGCTGTTCTGAAAAAGCAGAAGAGGAGGAAGAAGAAGATCATTTCATGGATAGAGACGAAAGGTTCTCACAGCAAGATGCAGCGTCAATCAATTTCAAAGGTAGGCTAGATCTAATGGACTTGTCACTTGGAAACAAAGACGTGGATGCAGCAGCTTTTATCCACGGCGGCGGCGGCAGCAGCTGTAGTACTAGTGCTATTGGTGCGAGTGCTTGTAGTAGCAGTGGCCATGAATCGATCGAGAAAGAACATATGTTTGACAAGGTGGTGACTCCAAGCGATGTAGGCAAGCTCAACCGTTTAGTGATACCAAAGCAACACGCAGAAAAGTACTTCCCGCTTGACTCTTCAAGCAACGAGAAAGGGTTGCTTCTGAATTTCGAAGACAGGAATGGCAAGTCCTGGAGGTTCAGGTACTCGTATTGGAATAGTAGTCAGAGTTATGTGATGACCAAAGGTTGGAGTCGTTTTGTCAAAGAGAAGAAGCTTGATGCTGGTGATATAGTGTCATTTCAGCGAGGGGTTGGCGATTTACACAAGCACCGTTTGTACATAGATTGGAGGAGAAGACCTGCTCATCATCATCATGCGTCTGACCATCAAACCACAGGTTTGATATCACCATTATTGATTCCAAATCAGATCTCTTTGCCTCAATACTCAATCAGATGGAGTGGAAGACTGTATTCACTGCCACAACCGTTGTCTACGGCTAGACAGCACCATGAGCATATGCAGCAGCAAATGAATTACAACTTTCATCCCTACTATCATCATCATCAGCAACTGCAGCATCTTAATCGTCATGGCAGAGGTCATCAGCATTTCAACGAGGTTTATTTCAGTTCACCTGCTTCAACTAGTCTTCAAAATCAAGCAATACGACAGGATGGTGGAGGTGCTCCATTGGTGATCGATTCAGTGCCAGTTGGTCATCACAGTGGTAAAGCGGCAGCCAAAAAGCTTAGATTATTTGGGGTTAACATGGAGTATTCTCCATCACCAGATGAAGAACCGCGGTGCCATATATTGTCCTCTACTGTTCTACCACCTAATGAGAATGCAACGATGGCTACTAATTCAGTCCTGCCTCCTCATCTTCCTTCCTCTTCTCTCTCATCACTTCAGTTGAGGCTACCTCATGGTGCTGCAATGCCATCTTACAGTCAAGCAAGATTTCAGGATAAAGAGGAAAGTTCTTTGCCTTTTGATTAG 1239 0.4455 MEMMEESKGCSEKAEEEEEEDHFMDRDERFSQQDAASINFKGRLDLMDLSLGNKDVDAAAFIHGGGGSSCSTSAIGASACSSSGHESIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGDLHKHRLYIDWRRRPAHHHHASDHQTTGLISPLLIPNQISLPQYSIRWSGRLYSLPQPLSTARQHHEHMQQQMNYNFHPYYHHHQQLQHLNRHGRGHQHFNEVYFSSPASTSLQNQAIRQDGGGAPLVIDSVPVGHHSGKAAAKKLRLFGVNMEYSPSPDEEPRCHILSSTVLPPNENATMATNSVLPPHLPSSSLSSLQLRLPHGAAMPSYSQARFQDKEESSLPFD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01191 412 MobiDBLite consensus disorder prediction 1 26 - -
Pte7g01191 412 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 13 359 IPR044800 GO:0003700
Pte7g01191 412 FunFam B3 domain-containing protein 87 209 - -
Pte7g01191 412 Gene3D - 87 209 IPR015300 -
Pte7g01191 412 SUPERFAMILY DNA-binding pseudobarrel domain 91 189 IPR015300 -
Pte7g01191 412 CDD B3_DNA 92 181 IPR003340 GO:0003677
Pte7g01191 412 Pfam B3 DNA binding domain 94 198 IPR003340 GO:0003677
Pte7g01191 412 ProSiteProfiles B3 DNA-binding domain profile. 94 199 IPR003340 GO:0003677
Pte7g01191 412 SMART B3_2 94 199 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01191 Pte-Chr7 36379281 36381657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01191 86 338 RAV Transcription Factor Family AT2G46870 53.640 4.24e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte7g01191 B3 5.5e-30 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01191 K09287 - qsa:O6P43_018503 372.859