Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01188 ATGGACACCTGCTCCTCCGAAGAGGAAGTGGTAGTTAAGACAAGAAAGCCTTATACTATTACAAAGCAACGGGAGCGTTGGACAGATGAGGAGCATAATAGGTTTCTGGAAGCATTGAAACTGTATGGACGAGCATGGCAGCGAATAGAAGAGCACATAGGAACAAAGACTGCTGTGCAGATCAGAAGCCACGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCTCTTATCAAAGGGGTATCAATAGGAGAAGCTCTTGACATAGAAATTCCACCTCCCCGTCCGAAAAGAAAACCAAGCAATCCCTATCCTCGGAAAAACAATGCGGCTACCCCAACATCTCAAATCAGGGCAAAGGATGGAAAACTTGTACCGACTTCATCTACACCTTGTAAACCCGCATTTGACTTGGAGAAAGAACCACTTCCTGAGAATACTAATGGAGATGAGCGGCCCACAACTATGAAAGAAAGTAACGATGAAAACCAAGCGAAAGTGTATACCATTCTGCCAGCAGCTCCCTGTTCCTCTGTATCTTCAGCAACTAAAATTTCCTCAGCAGTAGCAGAGTCCCTGAGAAATTCCTGTGCATTGAGGGAAATACCTTCTGTCAAAGAGATTGTAAATGAGAACGAATCAAATGAATCTTTTGTTACTACTGAGCTTAAACAGAGTCTGAAGTTGGAGAAAGATGATACCAAACAGGCAGAACGCTGTAATGGAACAAGTAAACCCTCTAGAATGGCAAACTTGGATCCTTCACAAGTGAAGTCGTCCTCCGTTGAGAAAACAGGTGATTTGAACTGTCCATATGCAATAGATGACACGCAAGGCACTCAGAACTATCCAAGACATGTCCCTGTGCATGTCCTTGATGGAACCCTGGAAACGTGCACTCAATTTCATTCACATGCTATGCCATGCAAAGATTGTATATTTCATCCGGTGGGAGGTGTTAAGGGACAACCTAGTCTGTTCCCAAATTCTGCCTCATCAGATGCGAGCCAGTGTCAGAATAACAGTGTTAGATCTACCATTCACCAATCTTTACCTTCCTATCCTCCTTTCATGACAGCTCTGAATAACCAAGATGATTACCAATCATTTCTTAACAGTTCCACCACATTTTCGAGTCTCATTGTGTCTACTCTGCTACAAAATCCTGCAGCACATGCTGCAGCAAGTTTTGCTGCCACATTTTGGCCATATGCAAATATAGAAACTTCTGCCATTTCCCCGGCGAGCTCTCAAGGTTTTACCTCTAGACAGATGGGGTGTACACCAAGTACAGCGGCTATTGCGGCAGCAACTGTAGCTGCTGCAACTGCATGGTGGGCAGCACATGGCTTACTTCCTTTGTGTGCTCCACTTCATACTCCTTTTACATGTGCTCCAGCTTCTGCAGCACGAATGGCATCCATGGACACTGGTCAAGCACCAGAAGCCAAGACTTGCGAAGAAACTATTATCGATAATCCTTCCTTGCAAGAAAAACTACTTGACCCCGAACACTCAGAAGCTATAGAAGGTCAGAATTCTGCTTTGAGGTCTCCAGCTATATCATCATCAGAATCTGAGAAAAAATCTACCTCAGAAGTTATTGATCATGATAAAAGCACCGTCATTGCCGAGCATAATGATTCAAACAAAGCAAAAGGCAGAAAACAGGTCGACCGGTCCTCTTGTGGTTCTAACACAACATCTAGCAGTGAAATAGAAACAGATGCACTAGACAAGGACAAAAATGGGAAGGAAGATTCAAAAGCTCCAGAAGATAGTCAGGCAGCTACTGACTCCAGCAATCGTCGTGGTAGAACCTGCAGTAATAGTAGTGATTCTTGGAAGGAAGTCTCCGAAGAAGGACGGCTGGCTTTTCAAGCACTCTTCACACGAGAGGTATTGCCGCAGAGTTTTTCTCCGCCTCAGGATCTGAAAGATAAAGATCATGAGAAAGAAAATGTGCAAGAAAGTGAACATATAATGGATGATAAAGCAGCAGAGGCATCAGCCCTTGACCTTAGTGGCAAAAAATTCAATCCTCTTCCGCGAGGAGAGGTGAAAAGCTTGCCACTGATGGATCATGAAGTGGAAGATGGAGAACTGATTGTAGGACTCGGACAAGAAAAGCTCAAGTTTCGTCGCACAGGGTTTAAGCCTTACAAAAGGTGTTCAGTAGAGGCCAAGGAAAACAGGGCTGGACATGCAAGCAACCAAAGTGAAGAGAAAGGCCCCAAGAGAATACGCTTGGGAGGGGAGACTGCAACTTGA 2271 0.4443 MDTCSSEEEVVVKTRKPYTITKQRERWTDEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALIKGVSIGEALDIEIPPPRPKRKPSNPYPRKNNAATPTSQIRAKDGKLVPTSSTPCKPAFDLEKEPLPENTNGDERPTTMKESNDENQAKVYTILPAAPCSSVSSATKISSAVAESLRNSCALREIPSVKEIVNENESNESFVTTELKQSLKLEKDDTKQAERCNGTSKPSRMANLDPSQVKSSSVEKTGDLNCPYAIDDTQGTQNYPRHVPVHVLDGTLETCTQFHSHAMPCKDCIFHPVGGVKGQPSLFPNSASSDASQCQNNSVRSTIHQSLPSYPPFMTALNNQDDYQSFLNSSTTFSSLIVSTLLQNPAAHAAASFAATFWPYANIETSAISPASSQGFTSRQMGCTPSTAAIAAATVAAATAWWAAHGLLPLCAPLHTPFTCAPASAARMASMDTGQAPEAKTCEETIIDNPSLQEKLLDPEHSEAIEGQNSALRSPAISSSESEKKSTSEVIDHDKSTVIAEHNDSNKAKGRKQVDRSSCGSNTTSSSEIETDALDKDKNGKEDSKAPEDSQAATDSSNRRGRTCSNSSDSWKEVSEEGRLAFQALFTREVLPQSFSPPQDLKDKDHEKENVQESEHIMDDKAAEASALDLSGKKFNPLPRGEVKSLPLMDHEVEDGELIVGLGQEKLKFRRTGFKPYKRCSVEAKENRAGHASNQSEEKGPKRIRLGGETAT* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01188 756 MobiDBLite consensus disorder prediction 643 661 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 138 159 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 89 161 - -
Pte7g01188 756 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Pte7g01188 756 MobiDBLite consensus disorder prediction 727 756 - -
Pte7g01188 756 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Pte7g01188 756 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Pte7g01188 756 MobiDBLite consensus disorder prediction 594 615 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 511 528 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 574 593 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 633 661 - -
Pte7g01188 756 Gene3D - 26 74 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 510 618 - -
Pte7g01188 756 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Pte7g01188 756 SMART sant 23 71 IPR001005 -
Pte7g01188 756 MobiDBLite consensus disorder prediction 529 558 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 229 262 - -
Pte7g01188 756 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Pte7g01188 756 MobiDBLite consensus disorder prediction 559 573 - -
Pte7g01188 756 MobiDBLite consensus disorder prediction 727 749 - -
Pte7g01188 756 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Pte7g01188 756 PANTHER SWI/SNF COMPLEX-RELATED 8 634 - -
Pte7g01188 756 CDD SANT 26 69 IPR001005 -
Pte7g01188 756 MobiDBLite consensus disorder prediction 240 262 - -
Pte7g01188 756 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01188 Pte-Chr7 36323675 36334783 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte7g01188 Myb_DNA-binding 9.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01188 K12133 - gmx:100271888 800.816