Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01185 ATGGATAGGCTCCAAGGTCCCATGATCAGTTCATTTTTCTTTGGGGAACATCTGGAAGCAAACTGTTTAGATCAAAGTTCATTCAATACTGTCACGGATAGCTTCAAATTCAGAAGGATTGAAGATGAGGAAGAACAGTTTGATATTCTGGGGTTAGAAGATAAAATGCCGTTTCTGCAAATGCTTCAAAGTGTGGAACCACCACAAGCTTTTCCACTCAAAGAACCAAACTTTCAGACACTTTTGAAGTTACAGCACTTGAGAATGCCGTTGGAAGGAACAGCTATCGTACCTCAGATGGAGATTCGTGTTCAAGCTACAGAGCTTGAGAGCTGTGTGACACATGACATGTTGGAGCTACAATCCCCTGTGAAATCGGAAAGCAATGACCTTGAGCATCAACGTTCAGCTTCATGTATGGACAGAATGAGTTCAGACTCCAACCAAGAACAACTCATTTCAGCTGATAATTGTGTCAGGGATGTTAAAGCGGGAACTGCAACTGCTTGGGCGAACCCCCCACCTTGGCATAAACAAACACAGAGCTCAAAGTCTCAGTTAGTCAACCGGGAAAGAAGAAAGCGGAAAAGAACAAGGCCAACCAAGAACAAGGAAGACATAGAAAATCAACGAATGACCCACATTGCCGTTGAACGAAACCGGAGACGTCAAATGAATGATCACCTCAGTGTTCTAAGGTCACTGATGCCTACTTACTATATTCAACGGGGTGACCAGGCATCAATAATTGGAGGTGCAATAGACTTTGTGAAGGAATTGGAGCAGTTGTTACAATCCCTTGAAGCACAGAAGATAATAAGAAATGGTGAAGACGTTGAATCTAATGGCTTTCTGGGTTCTTCAACCCCAGATAATGGAGTTGGGTCATGTACAGAAGGAGACTGCGGACAAGGAATGAGGGCAGAAAAGAAATCAGGAGCAGCTGACATTGAGGTCACAGTGATTCACACTCATGTCAACTTGAAAATTCAATGTTTAGCGAAACCTGGGATGTTGTTGAAAGCCATAGTTGCTCTGGAGGATCTTAGGCTAACTGTTTTGCACCTGAACATTACTTCCTCAAAGGATTCAGTCCTTTACTCATTCAATCTCAAGATTGAAGACGATTGCAAACTAGGATCAGCCAATGAGATTGCAGAAGCTGTTCAACAGATATTTAGCTTCATCCATGGTGTCCTCAACTAA 1206 0.4279 MDRLQGPMISSFFFGEHLEANCLDQSSFNTVTDSFKFRRIEDEEEQFDILGLEDKMPFLQMLQSVEPPQAFPLKEPNFQTLLKLQHLRMPLEGTAIVPQMEIRVQATELESCVTHDMLELQSPVKSESNDLEHQRSASCMDRMSSDSNQEQLISADNCVRDVKAGTATAWANPPPWHKQTQSSKSQLVNRERRKRKRTRPTKNKEDIENQRMTHIAVERNRRRQMNDHLSVLRSLMPTYYIQRGDQASIIGGAIDFVKELEQLLQSLEAQKIIRNGEDVESNGFLGSSTPDNGVGSCTEGDCGQGMRAEKKSGAADIEVTVIHTHVNLKIQCLAKPGMLLKAIVALEDLRLTVLHLNITSSKDSVLYSFNLKIEDDCKLGSANEIAEAVQQIFSFIHGVLN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01185 401 MobiDBLite consensus disorder prediction 124 149 - -
Pte7g01185 401 PANTHER MAX DIMERIZATION, MAD 127 396 - -
Pte7g01185 401 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 271 IPR036638 GO:0046983
Pte7g01185 401 Gene3D - 199 281 IPR036638 GO:0046983
Pte7g01185 401 CDD bHLH_AtFAMA_like 212 271 - -
Pte7g01185 401 Pfam Helix-loop-helix DNA-binding domain 210 261 IPR011598 GO:0046983
Pte7g01185 401 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 209 260 IPR011598 GO:0046983
Pte7g01185 401 MobiDBLite consensus disorder prediction 168 207 - -
Pte7g01185 401 SMART finulus 215 266 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01185 Pte-Chr7 36302093 36305002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01185 61 393 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 42.975 4.38e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte7g01185 HLH 3.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01185 - - qsa:O6P43_018514 463.381