Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01180 ATGGGTGAATCAGTGTTGATCACGGGTGTTGGTGAAGAGGGTAAGATGAAAGTGGAGCTGGGAACGGAACAGGAGAAACAGAAGAAGAAGGATTGCAGCAAGGAGGTGAAAGATGATCATGATGGTTGTAGCACTAAAGACGTAATCAGGTGGGAGAAGTTTTTACCTAGAATGGTCTTGAGGGTTTTACTCGTAGAAGCTGATGATTCAACCCGCCAAATTATAGCTGCGCTTCTTCGTAAATGCTGCTACAGAGTTGCTGCAGTCGCGGACGGATTGAAGGCATGGGAAACACTAAAGATGAAATCTGATGACATAGATCTTATATTAACTGAAGTAGAATTGCCATCGATATCTGGATTTGCTCTTCTTACTCTAGTAATGGAGCACAACGATTTCAAGAACATTCCTGTTATAATGATGTCTTCGCATGACTCCATTAGCATGGCGCTGAAATGCATGCTGAAAGGTGCAGCGGACTTTCTGATAAAGCCTGTTCGGAGAAATGAGCTTCGCAACCTTTGGCAACATGTGTGGAGAAGGCATGCCCAAAAATTTGAAGCCACTTCGGAAAATAATGCAGCAAGCTGTCATTCAGGTGATTGTGTGGGTCACACTCAGAATGAAAAATGCAATGACAAAGAAAGTTATAGCCAAGGTGTGTACCAACTGAAAAGTAAGAGCACTTCTAATTTGAGCAATGGTGGTGTGCAGTGGAACAACGAATCTACCAAAATTGACAAAGAAATGGACTTGTTTGACAGTATAATTGGAGAAGAGGCTACTGTTTGCTGGGAAGCTTTGAACTTGAAGAGTATGGAAGCAGAAGAAGATCATGGCTCTGTTAAGACAATAATTCAAGATAAAATTGTAAGACCGGAATGCAGTAGAGGAAATGCTCGTGTCAGTATCCAAGCCAATGGCTTGAATAATGAAGTGGTTGCATCATCTAGAAAAGCTGTTGACTTGATTGGTACGATTGATCAGGTTCTGAGGACCACAGATGGAAATACTGGTGTCAATCATCAGAGGAACGAGTTTAGTAAGCAACTGTTGGAACTTACTTTAAGAAATGGTCCCAGTGAATTGAATCAGCGACCAATGGATGAGAGACAAGCTCTAAAGCATTCGAACACATCTGCCTTTTCATGGTATAGTAGTAAACCTTCCTCCTTGTATCCTGAGGGTTCTGCCAGAAGAGATTCCTCTGATCAGCATGGTTTTACGAGCCATGAGCATCATTCGACCTCCACAATCTTTGCTCAGTCTGGTCAAGCTGAATCAAAATTGCCTGGCCATGATAATGGGCTTCTTCCTGTGTCTGAGGTAATTTTTCATGACAAGTTTTCTGGACAAGGACAAGTAATTCCGTCAATGTTCTGTCAAGACTCAGGTGTAAGATGGAGCATCAATCAAGAATGCCACCCAGAGAATTCTGCTTTTTCTCCTAATGCCTCTTCTCAGTCGAATGATCCTCAAAATTGTAGCTCAGAACATAGCTTTCACCGATCTGCTGATGCAGCGAATAATCCAATCATGCTTGAAACTCCCCATGATGTGAAAAAATTGGTGCCTAAGGAGGAAGTGAGGCATGGTTCATCTCCTGCTGATCAGAGTGCTAATATTGACCCTGCAAATCATATTACTGGCAGCTCATATGGAAATATGGCAAATGGAAGTGATGGAAATGATTATTCTGCAATGACAGCGGGCAGTGCTCGTGGATCTTTTGATGATGGCACATGTTCTATGCATGATGGAGTTAAAACAGATTGTCTCTGTTCCAGCCAAAGGGAAGCAGCTCTAATAAAGTTCAGACTGAAGCGTAAAGATCGCTGCTTTGAGAAAAAGGTTAGGTACCAAAGTCGGAAAAGACTGGCAGAGCAGCGTCCAAGAGTGAAAGGGCAGTTTGTAAGACAAGCGCATACTGACCCTTCATTAGCTGATACTGGTTGA 1956 0.4264 MGESVLITGVGEEGKMKVELGTEQEKQKKKDCSKEVKDDHDGCSTKDVIRWEKFLPRMVLRVLLVEADDSTRQIIAALLRKCCYRVAAVADGLKAWETLKMKSDDIDLILTEVELPSISGFALLTLVMEHNDFKNIPVIMMSSHDSISMALKCMLKGAADFLIKPVRRNELRNLWQHVWRRHAQKFEATSENNAASCHSGDCVGHTQNEKCNDKESYSQGVYQLKSKSTSNLSNGGVQWNNESTKIDKEMDLFDSIIGEEATVCWEALNLKSMEAEEDHGSVKTIIQDKIVRPECSRGNARVSIQANGLNNEVVASSRKAVDLIGTIDQVLRTTDGNTGVNHQRNEFSKQLLELTLRNGPSELNQRPMDERQALKHSNTSAFSWYSSKPSSLYPEGSARRDSSDQHGFTSHEHHSTSTIFAQSGQAESKLPGHDNGLLPVSEVIFHDKFSGQGQVIPSMFCQDSGVRWSINQECHPENSAFSPNASSQSNDPQNCSSEHSFHRSADAANNPIMLETPHDVKKLVPKEEVRHGSSPADQSANIDPANHITGSSYGNMANGSDGNDYSAMTAGSARGSFDDGTCSMHDGVKTDCLCSSQREAALIKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQAHTDPSLADTG* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01180 651 MobiDBLite consensus disorder prediction 18 42 - -
Pte7g01180 651 Pfam Response regulator receiver domain 62 173 IPR001789 GO:0000160
Pte7g01180 651 MobiDBLite consensus disorder prediction 477 502 - -
Pte7g01180 651 MobiDBLite consensus disorder prediction 412 429 - -
Pte7g01180 651 CDD psREC_PRR 62 165 - -
Pte7g01180 651 ProSiteProfiles CCT domain profile. 598 640 IPR010402 GO:0005515
Pte7g01180 651 Gene3D - 58 213 - -
Pte7g01180 651 MobiDBLite consensus disorder prediction 624 651 - -
Pte7g01180 651 PANTHER TWO-COMPONENT RESPONSE REGULATOR 60 359 IPR045279 GO:0009736
Pte7g01180 651 Pfam CCT motif 598 640 IPR010402 GO:0005515
Pte7g01180 651 MobiDBLite consensus disorder prediction 393 434 - -
Pte7g01180 651 SUPERFAMILY CheY-like 60 188 IPR011006 -
Pte7g01180 651 ProSiteProfiles Response regulatory domain profile. 61 179 IPR001789 GO:0000160
Pte7g01180 651 SMART REC_2 60 175 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01180 Pte-Chr7 36262428 36267130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01180 595 643 Response Regulator Gene Family AT5G24470 79.592 7.10e-19 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pte7g01180 Response_reg 2.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01180 K12130 - qsa:O6P43_027438 526.939