Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01173 ATGAGTATATCTGTGAATGGCCAATCTCAGGTCCCTCCTGGATTCAGGTTTCATCCGACAGAGGAAGAACTTTTGCAGTATTATCTGAGGAAGAAAGTTTCATATGAGAAGATTGACCTTGATGTTATTCGTGATGTTGATCTCAACAAGCTGGAGCCTTGGGATATTCAAGAGAAGTGCAAGATAGGAACCACTCCTCAGAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCCACCGGAACTCGAACCAATAGAGCCACAGCCGCCGGATTCTGGAAGGCAACAGGCCGTGATAAGGTGATATTTAGCAACTGCAGGCGGATTGGAATGAGAAAAACTCTGGTTTTCTATAAAGGCCGTGCTCCGCATGGCTTGAAGTCGGATTGGATCATGCATGAGTACAGACTTGATGAAAATAGCAGCACTGATGCCAACATTGTCTCTAATGTAATGGGAGAGACATCACAAGAAGAAGGGTGGGTGGTATGCAGAATATTCAAGAAGAAGAACCACCTGAAAACCCTAGATAGCCCGGGTCGTAATGAATCAAGAGGAAGTCATTTCGTTGATTCATGTACTGAAGGAGCTTTAGAGCAAATACTTCAGCAAATGGGGAGTACTTGCAAGGAAGAAAATGAAGTTAATGTCAAGCAAGGAAGATCATCTCTCAGGCCAATTGAAACAGCTATGAACAATGGCTATTTCCAGGACAGGTTTTTCAAGCTTCCAAGCTTGGAAAGCCCCAACTCAACAAGTAGTCAGAGTTGTTACCAACCAATGATACAGATGCTAACTCCAGAAAATGAAGTGACAATCGGAAATCATCATCAAGTGACCCGTAACAGTAACACTGAAGCTGACAATAACTTGGGGTACCCAATGGATTCATCTGGTTCTTCAGCAGGTCTCACTGACTGGGCAGCGCTTGATCGCCTTGTTGCTTCTCAGCTCAATGTTTGCCAAACTGAGTCTTCTAGACAGTTGGCTTGCTTCAATGAACCCACCATGGCAGCTTACTGCAGTACAGCTGATGAGCACGATCATCTTCAATTACCAACCTTAAGATCATCATCATCTCCATCAACAACATTATCATCATCCCAAAGGGCCAATTACATCACTCCCATCATGGACTATAACTGTGAAATTGACTTGTGGAGCTTTGCACGATCAACATCATCGTTGCCAAATGTTGAAAATGGATGCATAACAGAATAA 1227 0.4336 MSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIFSNCRRIGMRKTLVFYKGRAPHGLKSDWIMHEYRLDENSSTDANIVSNVMGETSQEEGWVVCRIFKKKNHLKTLDSPGRNESRGSHFVDSCTEGALEQILQQMGSTCKEENEVNVKQGRSSLRPIETAMNNGYFQDRFFKLPSLESPNSTSSQSCYQPMIQMLTPENEVTIGNHHQVTRNSNTEADNNLGYPMDSSGSSAGLTDWAALDRLVASQLNVCQTESSRQLACFNEPTMAAYCSTADEHDHLQLPTLRSSSSPSTTLSSSQRANYITPIMDYNCEIDLWSFARSTSSLPNVENGCITE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01173 408 Gene3D NAC domain 20 176 IPR036093 GO:0003677|GO:0006355
Pte7g01173 408 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 277 - -
Pte7g01173 408 FunFam NAC domain-containing protein 20 175 - -
Pte7g01173 408 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Pte7g01173 408 ProSiteProfiles NAC domain profile. 11 171 IPR003441 GO:0003677|GO:0006355
Pte7g01173 408 SUPERFAMILY NAC domain 7 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01173 Pte-Chr7 36218033 36219716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01173 1 390 NAC Transcription Factor Family AT2G46770 54.863 3.68e-134 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g01173 NAM 1.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01173 - - gmx:100793308 509.605