Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01172 ATGGACAAGACTTTAGTTCATCACCAGAACAAGATGATTAGAGAACTTGAAAGACTGAGCAAACTCTGTCATGATAATCTAGTCCGACCCTTGGGCTATGTTATCTATGAAGACGTTGCTCTTCTACTGCAGCATCACTTACCTAATGGAACATTAGCTCAGCTTCTTCACGAATCAACAAAGGAACCTGAATATCGACCTGACTGGCCAATAAGACTTTCAATTGCTATTGGAGTGGCAGAAGGGTTGGCTTTCCTTCATCATTTGGCAGTTATCCATCTTGACATTTCCTCTGGTAATGTGCTCTTGGATGGAGACTTCAAGCCTTTGGTTGGAGAAATTGAGATTTCAAAACTTATTGATCCAACCAAAGGTACTGCCAGTATAAGTCAAGTTGCAGGCTCTTTTGGCTATATCCCACCAGAAGTGAAACTCCTGAACAGTCCTTTGATGTCCCGTCAAACTACTACTATTGATAAGGAAATTCACCCTCCACACAATCATGGCAGTATCATGAGCATGAGACATCACAGTAGTCTCATGCAAGGATCAGGCATAGGTGGGGGTTGGCAGTTGGCATGGAAATGGTCTGAAAGAGAAAATGAGGATAGAAAGAAGGAAGGAGGATTTAAAAGAATATATTTACATCAGGAAGGAGTTCCTGCATCTCGCCGAGGTTCCCTTGCTTCACTTCCTAGCAGTGTCGTTCATGCAGATGGTGAGTATATCCATGCTTCTGTGTTGGTAAGCCAACCAGCTCTTTACTCCAAGGATCTTCTAGATGAGAAGCTAGTCGGTGTGGACTCATCTAAATGCGTGCGACAAACAGTTCGGTGTGGGAGAAGAAGGGATGAAGCAACTGGACTGAAGTGTCTCCTCTGCGCTTCGTCTCTGTGTTATCGTCTCTGCTAG 912 0.4397 MDKTLVHHQNKMIRELERLSKLCHDNLVRPLGYVIYEDVALLLQHHLPNGTLAQLLHESTKEPEYRPDWPIRLSIAIGVAEGLAFLHHLAVIHLDISSGNVLLDGDFKPLVGEIEISKLIDPTKGTASISQVAGSFGYIPPEVKLLNSPLMSRQTTTIDKEIHPPHNHGSIMSMRHHSSLMQGSGIGGGWQLAWKWSERENEDRKKEGGFKRIYLHQEGVPASRRGSLASLPSSVVHADGEYIHASVLVSQPALYSKDLLDEKLVGVDSSKCVRQTVRCGRRRDEATGLKCLLCASSLCYRLC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01172 303 SUPERFAMILY Protein kinase-like (PK-like) 8 144 IPR011009 -
Pte7g01172 303 Pfam Protein tyrosine and serine/threonine kinase 7 143 IPR001245 GO:0004672|GO:0006468
Pte7g01172 303 ProSiteProfiles Protein kinase domain profile. 1 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01172 303 SMART tyrkin_6 3 181 IPR020635 GO:0004713|GO:0006468
Pte7g01172 303 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 156 - -
Pte7g01172 303 ProSitePatterns Tyrosine protein kinases specific active-site signature. 91 103 IPR008266 GO:0004672|GO:0006468
Pte7g01172 303 Gene3D Transferase(Phosphotransferase) domain 1 2 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01172 Pte-Chr7 36211496 36215133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01172 1 142 Receptor kinase-like Gene Family AT2G41820 77.465 1.93e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte7g01172 PK_Tyr_Ser-Thr 2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01172 - - qsa:O6P43_006509 264.618