Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01170 ATGGGGAAGAAGGGAGGTAGCTCGTGGTTGACTGCTGTGAAAAGAGCATTCAGATCTCCATCCAAAGACAGTGACAAAAAGAGTAGCAGAAGAAGACTCGATCGTGATCAAGAAGAAGACGAGGAAAAGACACGAGAAAAGCGAAGATGGATATTTCGGAAACCACCAAGCCAAGAATCAAGCACACTACAAACAACAACGCCAACAAAGGGTAAGCCTGATTTGGCTACTGGAGGCTCTGCAACAACAGAACATGCATCAGCCGTAGGGACAGTTGCTACATCTGCTGCTGATCAAAAGCATGCTCTAGCAGTGGCAGTAGCCACTGCGGAAGCTGCAATGGCTACTGCTCAAGCTGCCGCAGAGGTTGCGAGGTTGACGAGACCTTCTAGTCGTGCCAAAGAGCACTATGCTGCTATTGTGATTCAAACCGCTTTCAGAGGATATCTAGCAAGGAGAGCACTTCGCGCACTTAAGGGGCTTGTAAAGTTGCAAGCTTTGGTGAGAGGCCATAATGTTCGAAAGCAAGCAAAGATGACCCTTCGTTGCATGCAAGCTCTGGTTCGGGTGCAAGCTAGAGTGCTTGATCAACGCATGAGATTGTCTCATGATGGCAGCAAAGAATCTAAATTTAGTTACACAAATGGCTCGTGGGATTCGCGTCACGGTCAGGACATTTCCGACAGAAAATCAATCTCTAGAGAAGGAAGCAGCATTGCAGATGACTGGGATGAACGACCCCACACAGTTGAAGAAGTTAAAGCAATGTTGCAGCATAGGAAGGAAGCTTCAATGAAGCGTGAGAAATCTCTTTCTGAAGCTTTCTCTCAACAGATATGGAGAAACGGTAGAAGTACATCAATAGGCACTGAAGAGGAGATGGAAGAAAGACCCAAATGGCTTGAAAGGTGGATGGCAACGAAGCCATGGGAAACCAGAGGAAGAGCTTCAACTGATCAAAGAGAATCCATTAAAACAGTTGAAATTGATACATCTCAACCTTACTCATATTTAGCTTCAAACTTGAGAAGATCACATCCAAATTATCAGTACCATTCTCAGTATCAACCTCACAGGCTTAGTACACATTCAGTAGCTTCACCACTCCACAGAGTTCATCAAACTGGATTTGTTCACCAATCAACTATTACCCCTTCTCCAGCAAAATCGAGGCCTATCCAAGTCCGTTCTGCAAGTCCTCGTTTTAGTAGGGAAGATGTAAACTGCCATAGATCACAAACACCAAGTTTAAGGTCTAATTATCACTACAATGGTAATCTACACCAGACTGTTCGAGTCAGCAGTGCTAGCGGCACTGCTACTTTGCCCAATTACATGGCAATAACAGAGTCAGCTAAGGCTAGAATACGGTCCCAGAGTGCACCTAGGCAAAGACCTTCAACCCCAGAGAGAGACAGAGTTGGATCAGCAAAGAAAAGACTTTCATTCCCAGCTCCTGACCCTTATGGTGTTGGAATGGGACATGGAAGTTATGGCAGTTGTTTAAGGAGCCCAAGCTTTAAGAGTGTAAGTGGCTCACACTTTGGAGTGGAACAACAATCAAACTATTCTTCATGCTGCACTGAAAGTCTTGGTAGTGAGATTTCCCCTTCTTCCACTATTGACCTTAGAAGATGGTTGAGGTGA 1647 0.4517 MGKKGGSSWLTAVKRAFRSPSKDSDKKSSRRRLDRDQEEDEEKTREKRRWIFRKPPSQESSTLQTTTPTKGKPDLATGGSATTEHASAVGTVATSAADQKHALAVAVATAEAAMATAQAAAEVARLTRPSSRAKEHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRMRLSHDGSKESKFSYTNGSWDSRHGQDISDRKSISREGSSIADDWDERPHTVEEVKAMLQHRKEASMKREKSLSEAFSQQIWRNGRSTSIGTEEEMEERPKWLERWMATKPWETRGRASTDQRESIKTVEIDTSQPYSYLASNLRRSHPNYQYHSQYQPHRLSTHSVASPLHRVHQTGFVHQSTITPSPAKSRPIQVRSASPRFSREDVNCHRSQTPSLRSNYHYNGNLHQTVRVSSASGTATLPNYMAITESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYGVGMGHGSYGSCLRSPSFKSVSGSHFGVEQQSNYSSCCTESLGSEISPSSTIDLRRWLR* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01170 548 MobiDBLite consensus disorder prediction 222 241 - -
Pte7g01170 548 MobiDBLite consensus disorder prediction 378 418 - -
Pte7g01170 548 MobiDBLite consensus disorder prediction 453 488 - -
Pte7g01170 548 MobiDBLite consensus disorder prediction 18 54 - -
Pte7g01170 548 Gene3D - 132 188 - -
Pte7g01170 548 MobiDBLite consensus disorder prediction 1 83 - -
Pte7g01170 548 MobiDBLite consensus disorder prediction 205 241 - -
Pte7g01170 548 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Pte7g01170 548 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Pte7g01170 548 SMART iq_5 134 156 IPR000048 GO:0005515
Pte7g01170 548 SMART iq_5 157 178 IPR000048 GO:0005515
Pte7g01170 548 Pfam IQ calmodulin-binding motif 138 156 IPR000048 GO:0005515
Pte7g01170 548 Pfam IQ calmodulin-binding motif 162 178 IPR000048 GO:0005515
Pte7g01170 548 PANTHER IQ-DOMAIN 5-RELATED 1 485 - -
Pte7g01170 548 MobiDBLite consensus disorder prediction 55 73 - -
Pte7g01170 548 FunFam IQ-domain 11 134 185 - -
Pte7g01170 548 MobiDBLite consensus disorder prediction 378 397 - -
Pte7g01170 548 Pfam Protein of unknown function (DUF4005) 399 496 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01170 Pte-Chr7 36188233 36190793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01170 9 549 IQD Protein Family AT4G00820 56.318 2.48e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01170 - - qsa:O6P43_018534 765.377