Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01144 ATGAGGAGTGGAGACAAAAGTCTAAGGAGCTTCCACCTGCACCTACCTCATCTTCATCACAGTCACCATCACCATCACCATCATCACCATGGGAAGAAGCATGTTTTCAAAGATGTGCCAAAAGGATGTATGGCAATCAAAGTGGGACAAGGAGAAGAGCAACAGAGATTTGTGGTGCCGGTGATGTACGTGAACCACCCGTTGTTCATGCAGCTACTGAAAGAGGCTGAAGAAGAGTATGGGTTTGATCAGAAGGGTACGATTACAATCCCTTGCCATGTGAAGGAGTTTAGGTACGTCCAAGGCATGATTGACAGGGAGAAGTCCCTTCATCACCAACATCATCACCATCACGTTGGCTGCTTTGGATTTTGA 375 0.4667 MRSGDKSLRSFHLHLPHLHHSHHHHHHHHHGKKHVFKDVPKGCMAIKVGQGEEQQRFVVPVMYVNHPLFMQLLKEAEEEYGFDQKGTITIPCHVKEFRYVQGMIDREKSLHHQHHHHHVGCFGF* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01144 124 Pfam Auxin responsive protein 31 103 IPR003676 GO:0009733
Pte7g01144 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01144 Pte-Chr7 35853898 35854600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01144 38 116 Calmodulin-binding Proteins AT5G20810 47.500 7.96e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01144 K14488 - pvy:116108881 165.236