Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01121 ATGGTTGAGACTAAGTATGTTGAACGTCGAATAATCACCCGCAAGTTTGTAAAGCCAAAAACTAGGATGCGGTTGTCGGATGGGAGCAAACCACACCCGAAGGTTGTCCGGGTTGCTTACACTGATCACAATGCTACTGACTCGTCCAGTGATGATGAAGACGGTTATAGAAGCAGAGGTCCTTTCAAACAGACCCGATTGAAAAGAATTGTCAACGAGGTGAGGATTGTGGAGAACTTGGGGAGAATAAATGAGCGAACTGGTAAGAATTTTAAAGGGGTGAGGCAGAGAAAATGGGGAAGATGGGCTGCAGAGATTAAAGATCCCTTCACTAAAATAAGACTTTGGCTTGGTACGTTTGATACTGCAGAAGAGGCTGCTATGGCTTATGACAAGAAAGCTATTGAATTGATAGGACCTGATGCTTTCACTAATATCATCCAACCAGTAGTAGAACCTCAGGAACCTTTGTCTCCTCCTCCACCTCTACCATCTGGGATTGACATTGATACGGCTTGTTCTGTTCTGGATGAATTTGGACAGATGGAAAATGAGCCATCCAAAATTGATTTGGGTGTGAATTCTGATCAATACGGATTGGAATCACAAGCTTCGCGTTCACCTACATCTGTTCTTAGATTTCAACCAGCTCAGCTTGGGTTTGAGCCAGTGGGAAGTCACGAGTGGAGACCTGTTGCAGAATTGAAAGAAGAGGATGGGTTTGTGTGGTTAGCTCAACCAGAATTTGTCAGTGCATCCGTTGATATTGTTTGCGAAACTCCCTTAACGACATTATACGATGAAAATCACAGAACTAGTGAAAGTGTCAGTCACATTTCATTTGATTCGCATAAAGGATTCTCGTCCTGTACATGGGATGATGACATGTTTATTGAAGACAACCTTTGA 909 0.4301 MVETKYVERRIITRKFVKPKTRMRLSDGSKPHPKVVRVAYTDHNATDSSSDDEDGYRSRGPFKQTRLKRIVNEVRIVENLGRINERTGKNFKGVRQRKWGRWAAEIKDPFTKIRLWLGTFDTAEEAAMAYDKKAIELIGPDAFTNIIQPVVEPQEPLSPPPPLPSGIDIDTACSVLDEFGQMENEPSKIDLGVNSDQYGLESQASRSPTSVLRFQPAQLGFEPVGSHEWRPVAELKEEDGFVWLAQPEFVSASVDIVCETPLTTLYDENHRTSESVSHISFDSHKGFSSCTWDDDMFIEDNL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01121 302 CDD AP2 89 145 IPR001471 GO:0003700|GO:0006355
Pte7g01121 302 ProSiteProfiles AP2/ERF domain profile. 90 147 IPR001471 GO:0003700|GO:0006355
Pte7g01121 302 FunFam ethylene-responsive transcription factor RAP2-11 89 148 - -
Pte7g01121 302 Pfam AP2 domain 90 139 IPR001471 GO:0003700|GO:0006355
Pte7g01121 302 PRINTS Ethylene responsive element binding protein signature 113 129 IPR001471 GO:0003700|GO:0006355
Pte7g01121 302 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Pte7g01121 302 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 32 218 - -
Pte7g01121 302 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Pte7g01121 302 SUPERFAMILY DNA-binding domain 91 146 IPR016177 GO:0003677
Pte7g01121 302 SMART rav1_2 90 153 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01121 Pte-Chr7 35698444 35699557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01121 5 226 AP2-EREBP Transcription Factor Family AT4G27950 35.887 3.39e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g01121 AP2 6.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01121 - - qsa:O6P43_017734 180.644