Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01102 ATGAAGATTGAGGTGGGTTTAAGAGGGGGGCTATGGAATGATGAAGATAAGGCTATTGTGGCTACGGTATTGGGACCTCGAGCTTTCGATTACTTGGTAACAAGCTCAGTTTCTAACGAGAATTTGTTAATGACTGTGGGCGGTGATGAAAATTTGCAGAACAAGCTCTCTGATCTAGTAGAGCGTCCTGACTTGTCAAATTTTAGCTGGAACTATGCGATTCTGTGGCAAATTTCAAGATCCAAGTCAGGGGATTGGGTTTTGGGATGGGGAGATGGATCATGCAGAGAACCAAGGGAGGGGGAGGAGACTCAAGGTGGTGGCTTTGTTAATCTTCGTTTTGACGATGAGACTCTGCAGCATATGAGGAAAAGGGCGCTGCAGAAGCTGCATACAGTATTTGGGGATTCCGAGGAGGATAACTATGCCTATGGATTGGACCGTGTGACTGCTACCGAGATGTTCTTTCTGGCTTCCATGTACTTCTCATTCCCTCGTGGGGAAGGTGGTCCAGGAAAGTGCTTTGCTTCTGGTAAGCATATATGGCTGTGTGATTTGCTGAAATCTGGTTCAGATTACTGTGTTAGATCGTTCTTGGCAAAAACTGCCGGCATCCAGACTATTGTTTCAGTCCCAACTGAGTTAGGAGTGCTGGAATTGGGTTCTGTAAGGCAAGTACGTGAGAGCTTAGAGTTATTGCATACAATAAAGATGGTGTTTTCTACAAACTCATCAATCACCAAAGCCAGGCCTCTGTCTCCGCTGCCTGTATTCAACGGGAAGAAAGGCGAAAGTGTAATTTCCTCGCATCTGGTAGTTGAGGAGAAAGAGAGAGTTCCTAAAATTTTTGGCCAGGATCTGAATTCAGGGGACTTAGGTCGCCCGTATTTAAGAGAGAAGCTCGCCATTAGGAAGATGGAGGAGAAGCCTGGGGAGGAATACCCGAATGGAAGTAGAATTTCCTTAACAAGCTCTAGAAATGGCGGTATTCATGTTACAAGCTGGTCATCCATCCCTGGTGTGAAACAAACTAGTCCCGTTGAAATTTATGGCTCTCGCGGTTTGGCAAACAATGCACAAGAGCAAGTAAAAGGGGTTAGAGATGATTGTAAGCTTAATCGTTATCATCTACAAAAGCAGGTATCAATGGAGATTGATTTTTCAGGAGCCACTTCGAGGCCATCTCTGATAAAAAAGCCTGTAATTGTTGAATCACAACATTCAGATATCGAAGCTTCGTGCAAAGATGAAGATCTCTGTCTAACTGCCAGGAGGCCTCGTAAACGGGGAAGAAAGCCCGCAAATGGGAGAGACGAGCCCCTTAATCATGTAGAAGCAGAGCGGCAGCGGCGTGAGAAATTGAACCAGAGGTTCTATGCACTAAGGGCTGTTGTTCCAAATATTTCGAAGATGGACAAGGCCTCTTTATTGGGAGATGCCATTGCATATATTAATGAGCTCCAGGCAAAGCTCAGGATCAGGGAAGCTGAGAGGGAGAGATTTGGAATCACCTCTAGAGATGCAGTTGCTTTGGCTGATATGGCGAAAGTGGAGCAACAGTGCGCAGTTCCAGATGTAGCAGTTGAAGCAATCCAGGACAAGGTAGTTGTGCGGGTGAGCTGCCCTTTGGTTTCACACCCTGTTTCGAGAGTAATCCAACGATTCAAAGAGGCACAGGTCACAGTGGTGAATTCAGAACTCTCTGCTGCGAATGATACAGTGTTCCATACATTTGTGATTAAATCTCAAGGATCTGAACAGTTGACGAAGAAAAAATTGCTTGCAGCATTTTCGCCGGTATCTTCCTCATCCGCACAGCCACCGTCATCAACTGGTTAA 1839 0.4568 MKIEVGLRGGLWNDEDKAIVATVLGPRAFDYLVTSSVSNENLLMTVGGDENLQNKLSDLVERPDLSNFSWNYAILWQISRSKSGDWVLGWGDGSCREPREGEETQGGGFVNLRFDDETLQHMRKRALQKLHTVFGDSEEDNYAYGLDRVTATEMFFLASMYFSFPRGEGGPGKCFASGKHIWLCDLLKSGSDYCVRSFLAKTAGIQTIVSVPTELGVLELGSVRQVRESLELLHTIKMVFSTNSSITKARPLSPLPVFNGKKGESVISSHLVVEEKERVPKIFGQDLNSGDLGRPYLREKLAIRKMEEKPGEEYPNGSRISLTSSRNGGIHVTSWSSIPGVKQTSPVEIYGSRGLANNAQEQVKGVRDDCKLNRYHLQKQVSMEIDFSGATSRPSLIKKPVIVESQHSDIEASCKDEDLCLTARRPRKRGRKPANGRDEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLRIREAERERFGITSRDAVALADMAKVEQQCAVPDVAVEAIQDKVVVRVSCPLVSHPVSRVIQRFKEAQVTVVNSELSAANDTVFHTFVIKSQGSEQLTKKKLLAAFSPVSSSSAQPPSSTG* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01102 612 FunFam Transcription factor bHLH13 431 505 - -
Pte7g01102 612 CDD bHLH_AtAIB_like 435 508 - -
Pte7g01102 612 PANTHER MYC 38 596 IPR045084 GO:0003700|GO:0006355
Pte7g01102 612 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Pte7g01102 612 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 441 501 IPR036638 GO:0046983
Pte7g01102 612 MobiDBLite consensus disorder prediction 425 448 - -
Pte7g01102 612 Gene3D - 432 501 IPR036638 GO:0046983
Pte7g01102 612 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 438 487 IPR011598 GO:0046983
Pte7g01102 612 MobiDBLite consensus disorder prediction 432 448 - -
Pte7g01102 612 SMART finulus 444 493 IPR011598 GO:0046983
Pte7g01102 612 Pfam Helix-loop-helix DNA-binding domain 442 488 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01102 Pte-Chr7 35558917 35560755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01102 11 612 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 49.921 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte7g01102 bHLH-MYC_N 1.3e-51 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01102 - - qsu:111989355 823.928