Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01101 ATGGAGCGAGAGCAACCCCCGTACACTGAAGACGATGATCTCACTAACACCACCGATTCAACGGCTGCCGTCGCTTCTACACAACGAGGCGGTACACGCCATCCTGTGTACCACGGCGTTCGGAAGCGGCGGTGGGGGAAATGGGTGTCTGAAATCAGAGAGCCACGCAAGAAATCACGTATATGGCTCGGTTCTTTTCCAGTGCCTGAAATGGCAGCGAAGGCGTACGACGTTGCAGCGTATTGCTTGAAAGGCGAAAAGGCTCAGCTCAACTTTCCTGATGAAGTAGAAACCTTGCCGAAACCTTCTAGCTGTGCGGCTAGAGATATTCAAGCAGCTGCAGCTGAAGCAGCGAAGAAGATGATCAAGACTCGTACTGCTACAGAAACTTCATGCACAAGTGCCGTGTCCTCCGACGTCGACATGATCAACAGCAACGACAACGTTGTTGTCCTGTCCGCAGAAGATGGTGATATTGGCGATGGCGGAGAAGATGACTTCTGGGCTGAGATTGACTTGCCTGAGCTGATCATAAACAATAGGTTCCAATGGAATTCACGTGGGTCGTTGGTTTTCCCCGGTGATGCCACGGCATCGCTGCCCGACGGTGAGGCTCATCAGCCACAGTACATGGCGTGTCTGTAA 645 0.5256 MEREQPPYTEDDDLTNTTDSTAAVASTQRGGTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGEKAQLNFPDEVETLPKPSSCAARDIQAAAAEAAKKMIKTRTATETSCTSAVSSDVDMINSNDNVVVLSAEDGDIGDGGEDDFWAEIDLPELIINNRFQWNSRGSLVFPGDATASLPDGEAHQPQYMACL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01101 214 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Pte7g01101 214 FunFam Ethylene-responsive transcription factor 2 35 94 - -
Pte7g01101 214 CDD AP2 37 94 IPR001471 GO:0003700|GO:0006355
Pte7g01101 214 PRINTS Ethylene responsive element binding protein signature 75 95 IPR001471 GO:0003700|GO:0006355
Pte7g01101 214 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Pte7g01101 214 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 175 - -
Pte7g01101 214 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Pte7g01101 214 Pfam AP2 domain 35 85 IPR001471 GO:0003700|GO:0006355
Pte7g01101 214 MobiDBLite consensus disorder prediction 11 28 - -
Pte7g01101 214 MobiDBLite consensus disorder prediction 1 34 - -
Pte7g01101 214 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Pte7g01101 214 SUPERFAMILY DNA-binding domain 36 95 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01101 Pte-Chr7 35531764 35532922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01101 1 215 AP2-EREBP Transcription Factor Family AT1G01250 51.802 6.53e-60 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte7g01101 AP2 4.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01101 K09286 - fve:101292165 217.238