Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01054 ATGGGGTTTCCAGTGGGGTACACAGAGGTGTTCTCACCCAAACTGTTTCTCTACGCACTCTCTCTTCTGGGTTTCATCAGAAACCTCATTTTCACTCTGTTCCACTATCTTGGTGTCTCTGATTTCATCGAAACAGATATGGTATGGTCTGATACCTCCCAGCTCCAGGTACCCATTAACCCCTCTATATCTGCCATCCTGATCCGCGAACTCCTACCCGTCATCAAATTTGAAAAGCTTGTGTCGTGTTCTGAGGATGGAGATCCGCCGGAGAGCTGTTCAGTTTGCCTGGATGAGTTTCAAGAGGAGGAAGAGATCAGGTGTTTGACAAATTGCAAGCACATTTTTCACAGAGCTTGTTTGGACCGTTGGATGGACCACCGTCACAAAACCTGTCCTTTGTGTAGGACAACCTTTGTTCCAGATGGTTTGCAGAGTGAATTTAATCAACGGCTGTGGGTTGCTTCTGGGGTCACTGATTTTGATACCGAGTACGGTTCCATATGA 507 0.4675 MGFPVGYTEVFSPKLFLYALSLLGFIRNLIFTLFHYLGVSDFIETDMVWSDTSQLQVPINPSISAILIRELLPVIKFEKLVSCSEDGDPPESCSVCLDEFQEEEEIRCLTNCKHIFHRACLDRWMDHRHKTCPLCRTTFVPDGLQSEFNQRLWVASGVTDFDTEYGSI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01054 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 141 IPR013083 -
Pte7g01054 168 SMART ring_2 93 135 IPR001841 -
Pte7g01054 168 ProSiteProfiles Zinc finger RING-type profile. 93 136 IPR001841 -
Pte7g01054 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 22 153 - -
Pte7g01054 168 SMART ringv_2 92 136 IPR011016 GO:0008270
Pte7g01054 168 SUPERFAMILY RING/U-box 74 142 - -
Pte7g01054 168 Pfam Ring finger domain 92 136 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01054 Pte-Chr7 35222744 35223641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01054 1 159 C3H Transcription Factor Family AT1G63840 51.515 1.43e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01054 K16281 - cpap:110820950 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g01054 7 35222744 35223641 Pte7g01054 7 35222744 35223641 RCT