Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01036 ATGGATCGGAGAGACTCAATGTCATTATCTGGGTCTGGTTCTTACTTCATACAAAGAACTCAACCTGAGTTACAAACTGCTCCTGCAATTCGTCCAGTGTCGAATCCCAACATTCAATTTCAACCAAATATTGGCAGTGGTTCGCTTGGATCAACATTACCATTAGAATCGTCTACAGGAATTTCGCCCCATGGTGTCAATGTGGGTGCACCTCCTGGACCTCCTCCTGGGGAACCGGTGAAAAGAAAGAGAGGAAGGCCTAGGAAATATGGTCCTGATGGAACTGTATCATTGGCATTGTCACCCTCTTCTTCTTCTCATCCTGGGACTGTATCTCCCAATCAGAAACGCGGCAGAGGGCGCCCTCCCGGATCTGGCAAGAAACAACAGTTGTCTTCTTTCGGTTCGTTGCTGTCTGGTTCAGCTGGGATGGGGTTTACTCCACACGTCATCACTGTTGCAATTGGAGAAGATGTTGCAACAAAAATAATGGCATTTGCACAACAGGGACCAAGGGCTATTTGTATTTTGTCGGCTAACGGTGCTGTGTCTACTGTGACACTTCATCAACCTTCTACTTCTGGTGGCACTATCACATACGAGGGACGCTTCGAGATACTATGCCTTTCTGGATCGTACTTGCTTGCTGACGGTAACTCCCGGAATAGAACTGGAGGTATCAGTGTCTCACTCGCTAGTCCTGACGGGCGAGTCATCGGTGGAGGAGTTGGCGGAATGCTTGTTGCAGCAAGTCCTGTTCAGGTGATAGTGGGGAGCTTCATGTGGGGTGGTACAAGGACCAAACACAAGAAAAGAGAAGCTCATGAAGGTGCAGTGGATTCAGATCAACATCATCATCATCATCAGGCAATACACAATCCAGTTGCAGTAACCAGTGTTTCACCGAATGAAAATCTGACTCCAACTTCTTCCCTAGGTGGTGGTTGGCCTGCTTCACGGCCAATCGATATGCGTAACTCCCATGTCGACATTGATTTGATGCGTGGGTGA 1011 0.4807 MDRRDSMSLSGSGSYFIQRTQPELQTAPAIRPVSNPNIQFQPNIGSGSLGSTLPLESSTGISPHGVNVGAPPGPPPGEPVKRKRGRPRKYGPDGTVSLALSPSSSSHPGTVSPNQKRGRGRPPGSGKKQQLSSFGSLLSGSAGMGFTPHVITVAIGEDVATKIMAFAQQGPRAICILSANGAVSTVTLHQPSTSGGTITYEGRFEILCLSGSYLLADGNSRNRTGGISVSLASPDGRVIGGGVGGMLVAASPVQVIVGSFMWGGTRTKHKKREAHEGAVDSDQHHHHHQAIHNPVAVTSVSPNENLTPTSSLGGGWPASRPIDMRNSHVDIDLMRG* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01036 336 Gene3D - 148 288 - -
Pte7g01036 336 MobiDBLite consensus disorder prediction 1 133 - -
Pte7g01036 336 MobiDBLite consensus disorder prediction 97 113 - -
Pte7g01036 336 MobiDBLite consensus disorder prediction 7 64 - -
Pte7g01036 336 MobiDBLite consensus disorder prediction 270 289 - -
Pte7g01036 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 260 IPR005175 -
Pte7g01036 336 SMART AT_hook_2 81 93 IPR017956 GO:0003677
Pte7g01036 336 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Pte7g01036 336 MobiDBLite consensus disorder prediction 299 314 - -
Pte7g01036 336 ProSiteProfiles PPC domain profile profile. 142 282 IPR005175 -
Pte7g01036 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 52 299 IPR039605 GO:0003680
Pte7g01036 336 CDD DUF296 147 260 IPR005175 -
Pte7g01036 336 FunFam AT-hook motif nuclear-localized protein 1-like 148 278 - -
Pte7g01036 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 146 266 - -
Pte7g01036 336 MobiDBLite consensus disorder prediction 299 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01036 Pte-Chr7 35064217 35069270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01036 1 337 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.000 4.05e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01036 - - qsa:O6P43_017611 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g01036 7 35064217 35069270 Pte7g01036 7 35064217 35069270 RCT