Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01027 ATGGCATTCACAGGAACTCTTGACAAATGCAAAACTTGTGACAAGACTGTCTATGTTGTTGACATGTTGTCCCTTGAAGGAGTTCCTTACCACAAAACATGCTTCAAGTGCACCCACTGCAAGGGAAATCTTACAATGAACAGCTACTCCTCCATGGATGGAGTCCTCTATTGCAGACCACACTTTGAGCAGCTTTTCAAGGAATCTGGAAATTTCAGCAAGAATTTCCAGACCCCAAGCAGATTCTCATCCATGTTCAGTGGAACTCAAGACAAATGTTCAGTTTGCTCAAAAATAGTCTATCCACTAGAGAAGGTGACTCTGGAAGGAGAGTGCTACCACAAGAACTGCTTTAGGTGTGCTCATGCAGGTTGTCCTCTTACACATTCTTCCTATGCTGCTCTTGATGGTTTCCTCTACTGCAAACACCACTTTGCTCAACTCTTCATGGAGAAAGGAAACTACAGTCATGTACTCAAGGGTGCTGCCAGTAGGAAGAATGCTACACTAACTCCAGAACCAGTAGAGCCAGAGGCAGCTGAAGGTGAAGAACAGCCCCAGCCTCAAGAGCAACCTACAGAAGAGGAATCTTAA 594 0.4478 MAFTGTLDKCKTCDKTVYVVDMLSLEGVPYHKTCFKCTHCKGNLTMNSYSSMDGVLYCRPHFEQLFKESGNFSKNFQTPSRFSSMFSGTQDKCSVCSKIVYPLEKVTLEGECYHKNCFRCAHAGCPLTHSSYAALDGFLYCKHHFAQLFMEKGNYSHVLKGAASRKNATLTPEPVEPEAAEGEEQPQPQEQPTEEES* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01027 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
Pte7g01027 197 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Pte7g01027 197 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Pte7g01027 197 Gene3D Cysteine Rich Protein 6 74 - -
Pte7g01027 197 Gene3D Cysteine Rich Protein 87 157 - -
Pte7g01027 197 SMART lim_4 9 61 IPR001781 -
Pte7g01027 197 SMART lim_4 92 144 IPR001781 -
Pte7g01027 197 MobiDBLite consensus disorder prediction 166 197 - -
Pte7g01027 197 ProSiteProfiles LIM domain profile. 91 151 IPR001781 -
Pte7g01027 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 119 158 - -
Pte7g01027 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 85 118 - -
Pte7g01027 197 PANTHER OS06G0237300 PROTEIN 6 80 - -
Pte7g01027 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 2 35 - -
Pte7g01027 197 Pfam LIM domain 10 65 IPR001781 -
Pte7g01027 197 Pfam LIM domain 93 148 IPR001781 -
Pte7g01027 197 FunFam LIM domain and actin-binding 1 4 74 - -
Pte7g01027 197 FunFam LIM domain and actin-binding 1 87 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01027 Pte-Chr7 35013572 35015154 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Pte7g01027 LIM 3.2e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01027 - - qsa:O6P43_017591 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g01027 7 35013572 35015154 Pte7g01027 7 35013572 35015154 RCT