Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01022 ATGAATATGATGCGTAGGTTGAAGAGCATTGCTTCAGGGAGGACATCTATTTCCTCAGATCCTGGTGGGGATTCCAGCACAAAGAGAGCTAAGACTGATCAAGAAGATCAGGTTAACACAGATCTATACCCTGTTGAAAGGAATGGCATAGGTCAAGAAGCAACTACTGCAGGCACATCCAACATTTCCGGCATGTCTATGTCCGAGAAGTCAGGCTACGGTCAACTTCCACAAGAATTGCATGAAATGAGAATCATGGATGCGAAAAGCAGCCAACATAATGAAAAGGAAACGCAGCCAGCCTATATTAATGGTAATGGAACTGAAACTGGACAGATAATTACCACTTCCATTGGCGGGCAAGATGGACAACCAAAACAGACAATTTCTTATATGGCAGAACGTATTGTGGGGACCGGTTCTTTTGGAGTTGTATTTCAGGCTAAGTGCTTGGAAACTGGTGAAGTAGTTGGCATAAAGAAAGTGCTGCAGGACAAGAGATATAAAAATAGGGAACTCCAGGTCATGCGGATCCTTGATCATCCTAATGTGGTACAAATGAAGCACTGCTTCTACTCAACTACTGACAAGGATGAGGTGTACCTTAATATAGTCATGGAGTATATATCTGAAACTGTTTATAGAGTTTCTAAACACTATGTGCGGATGCACCAAAGTATGCCTATAATTTATGTGCAGCTTTACACATACCAGATATGCCGTGCCTTAAATTACATGCATCATGTAATTGGAGTGTGTCATCGAGACATTAAGCCTCAGAACTTACTGGTTAATCCCCATACTCACCAACTAAAGATCTGTGATTTTGGGAGTGCAAAGATGTTGGTGCCAGGTGAACCCAACATATCATATATATGCTCACGTTATTATAGGGCACCAGAACTTATTTTTGGGGCGACAGAGTACACAACTGCTATTGATATATGGTCAGTTGGCTGTGTTTTGGCCGAGCTCCTTCTAGGACAGCCTTTATTTCCTGGGGAGAGTGGTGTTGATCAGCTGGTAGAAATAATTAAGATTTTGGGGACACCAACCCGAGAAGAGATGAAGTGTATGAATCCAAACTACACCGAATTCAAGTTCCCTCAACTTAAAGCTCACCCTTGGCATAAGGTTTTCCACAACAGACTGCCTCCTGAAGCAGTGGATCTTGTCTCAAGACTGCTTCAATATTCACCAAATTTGCGTTGCACTGCTTTGGAGGCATGTGCACATCCCTTCTTTGATGATCTGAGAGACCCCAATACTTGCTTGCCAAATGGGCGACCACTACCTCCTTTATTCAATTTCACTGCTCAAGAACTTGCTGGAGCACCTGCTGAGTTGCGTAACCATCTCATTCCTGATCATGCTAAGAATTAA 1383 0.4281 MNMMRRLKSIASGRTSISSDPGGDSSTKRAKTDQEDQVNTDLYPVERNGIGQEATTAGTSNISGMSMSEKSGYGQLPQELHEMRIMDAKSSQHNEKETQPAYINGNGTETGQIITTSIGGQDGQPKQTISYMAERIVGTGSFGVVFQAKCLETGEVVGIKKVLQDKRYKNRELQVMRILDHPNVVQMKHCFYSTTDKDEVYLNIVMEYISETVYRVSKHYVRMHQSMPIIYVQLYTYQICRALNYMHHVIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEMKCMNPNYTEFKFPQLKAHPWHKVFHNRLPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPNTCLPNGRPLPPLFNFTAQELAGAPAELRNHLIPDHAKN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01022 460 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 95 459 - -
Pte7g01022 460 FunFam Glycogen synthase kinase-3 beta 115 210 - -
Pte7g01022 460 Gene3D Phosphorylase Kinase; domain 1 116 210 - -
Pte7g01022 460 MobiDBLite consensus disorder prediction 9 25 - -
Pte7g01022 460 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01022 460 MobiDBLite consensus disorder prediction 1 41 - -
Pte7g01022 460 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01022 460 CDD STKc_GSK3 126 418 IPR039192 -
Pte7g01022 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pte7g01022 460 SUPERFAMILY Protein kinase-like (PK-like) 130 441 IPR011009 -
Pte7g01022 460 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g01022 460 Gene3D Transferase(Phosphotransferase) domain 1 211 459 - -
Pte7g01022 460 FunFam Shaggy-related protein kinase kappa 211 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01022 Pte-Chr7 34970007 34976218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01022 137 418 Core Cell Cycle Gene Families AT1G76540 35.052 5.48e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte7g01022 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01022 K27414 - qsa:O6P43_017567 808.905