Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01015 ATGGCAGGAGCTAAAACTCCTAACTGTACTGATCAGTCTACTCCCACTGCGACCACTGTGGTTGCCACAAACAATGGTAGACCCAACCCACCTAGCAAATCCACCATGCGAAGGTTTGTGGGGGTGAGGCAAAGGCCATCAGGAAGATGGGTGGCAGAGATCAAAGACTCTTCCCAACGTGTAAGATTGTGGCTTGGAACTTACGACACTCCAGAAGCAGCAGCTAGGGCTTATGACGAAGCAGCCCGTGCCCTACGTGGTGAGAATGCAAGAACCAATTTTGCGCAAGTGAACAGCATCACTGATCAACAAAGTCCGGTGAGGACTCCTTCTCATCTCGGTTCTGGGTCAGCTTCTGATGGGAGACTTGGGCTGAGCTTTTCATCGTTGAAAGCCAAATTGAGCAAGAACCTTCAGAATATCATGGCTAGGGCAAGGGACGGCAAGTCCTCGAAGAGCAGGGTCAGCGACCATTTCGCTTTTGCAAGCATTTTCCACCGCGGGAGTTTTCAATACCAAACTCCTCGTGATGTGGATATGAAGAACATGGAGAAAGTTGTTCAACCTAGTATCATTGTTCCACCAGTAGAAAGTGAGGCTTGCTCTTGGGAAAACTCCAGTATTTCTGACTGCAGCTCTGAGTGGTTGGGATTCAGACAAGGTGGTCTGGACTCTGATGGTTCAGATGTCGGAGAAATTGGGTTTGTTGACCAATTGATGGGTTGGATTGATAGCCCTGATATTTGCCCTAGTGAGGTTTCAAGGAGTAAGAGGTTCAAGGTTTCTTCTTCAGTGATGGTGCCTCCAACTTTCAGTGGTTCACCATATGATGGTTGTTGCTCTCCATACAGTGGCAGTGATTCTCCATATCATGGTTATGGCTCCCCATATAATTATAGGGAAGACCATTGA 912 0.4792 MAGAKTPNCTDQSTPTATTVVATNNGRPNPPSKSTMRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEAAARAYDEAARALRGENARTNFAQVNSITDQQSPVRTPSHLGSGSASDGRLGLSFSSLKAKLSKNLQNIMARARDGKSSKSRVSDHFAFASIFHRGSFQYQTPRDVDMKNMEKVVQPSIIVPPVESEACSWENSSISDCSSEWLGFRQGGLDSDGSDVGEIGFVDQLMGWIDSPDICPSEVSRSKRFKVSSSVMVPPTFSGSPYDGCCSPYSGSDSPYHGYGSPYNYREDH* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01015 303 FunFam ethylene-responsive transcription factor RAP2-11 37 96 - -
Pte7g01015 303 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Pte7g01015 303 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Pte7g01015 303 MobiDBLite consensus disorder prediction 99 120 - -
Pte7g01015 303 SUPERFAMILY DNA-binding domain 39 95 IPR016177 GO:0003677
Pte7g01015 303 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Pte7g01015 303 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Pte7g01015 303 CDD AP2 38 97 IPR001471 GO:0003700|GO:0006355
Pte7g01015 303 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 9 156 - -
Pte7g01015 303 MobiDBLite consensus disorder prediction 1 32 - -
Pte7g01015 303 Gene3D AP2/ERF domain 37 97 IPR036955 GO:0003700|GO:0006355
Pte7g01015 303 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Pte7g01015 303 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01015 Pte-Chr7 34830194 34831105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01015 32 95 AP2-EREBP Transcription Factor Family AT5G19790 70.312 2.74e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g01015 AP2 6.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01015 K09286 - qsa:O6P43_017554 381.719