Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01007 ATGGTTAGCAATAATCCTCAGTATTATGAAGATGATGACGTTCCCCTTCCCGGTTTCCGTTTCCATCCAACAGATGAGGAGCTTGTCGGATTCTTTCTTCGCCGGAAAATCGACAAGAAGCCCATCAGTATTGAACTTATCAAACAGATTGATATCTACAGATACGATCCTTGGGATCTTCCAAAATTCAGTAGTATCAGTGGGGAGAAGGAGTACTATTTCTTTTGCAAAAGAGCAAGAAAATATAAGAACAGCGTAAGGCCGAATAGAGTCACTGGTTCTGGGTTCTGGAAAGCAACTGGTTTAGACAAACCTGTGTATTCAAATGGAGGAGAAGGCCAGAATTGCATTGGATTGAAGAAAACATTACTCTATTACCGTGGCAGTGCCGGAAAAGGAACCAAAACCGATTGGATGATGCATGAGTTTCGCCTTCCGTCAACTGACATCGATAGCCACCTTATCAAAAACAACGAGACCAGTACTGCTACTGCAAAAAATCTCCCAGACGCTGAAACTTTAACGCTCTGCCGAATTTTCAAGCGAAATGTGTCGTATAGGAAGAACCTACCTGACTGGAAACAAATGTCAGCTAAGCGTTCCAACGACAAAATCTCCAATAGAGCTTGCAGCACCGTGGATTCCAATCGTCAAGAAGCTTACATCAGTTTTGCAAATGGTGGCGAGCATGAGTTTTATGAGAAGAAGCCTATAAAGAATTACAGTGATCGAAGGAACCAGTTTTCTATATGTGACCGTCAGTTTAATCCATCAGTAACAATGTCTCAATCTCGGACAGCAGCTTCTTCAGCTTCTAGCATTTGGATGAATCAAAATGCAAGTGACTTCTTCGAACACAACAGCTGGGATGAGCTTCGCTCGGTTATGGAGTTTGCACGTGATCGATTTCAGTTTCCTGCTGATCTTTAG 930 0.4258 MVSNNPQYYEDDDVPLPGFRFHPTDEELVGFFLRRKIDKKPISIELIKQIDIYRYDPWDLPKFSSISGEKEYYFFCKRARKYKNSVRPNRVTGSGFWKATGLDKPVYSNGGEGQNCIGLKKTLLYYRGSAGKGTKTDWMMHEFRLPSTDIDSHLIKNNETSTATAKNLPDAETLTLCRIFKRNVSYRKNLPDWKQMSAKRSNDKISNRACSTVDSNRQEAYISFANGGEHEFYEKKPIKNYSDRRNQFSICDRQFNPSVTMSQSRTAASSASSIWMNQNASDFFEHNSWDELRSVMEFARDRFQFPADL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01007 309 Gene3D NAC domain 24 186 IPR036093 GO:0003677|GO:0006355
Pte7g01007 309 Pfam No apical meristem (NAM) protein 17 145 IPR003441 GO:0003677|GO:0006355
Pte7g01007 309 ProSiteProfiles NAC domain profile. 15 182 IPR003441 GO:0003677|GO:0006355
Pte7g01007 309 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 259 - -
Pte7g01007 309 FunFam NAC domain-containing protein 35 24 185 - -
Pte7g01007 309 SUPERFAMILY NAC domain 15 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01007 Pte-Chr7 34778372 34780075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01007 3 223 NAC Transcription Factor Family AT5G39820 50.862 1.15e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g01007 NAM 6.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01007 - - gmx:100808692 351.673