Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01004 ATGGATCATAATGGTTCTTCATCTTCGTATCCCCCCCATCAGAATCCATACGCATACCCCCCTCCTCATCCTTCTGCATATCCACCTTCAAGTCAACCACCTTACCCTCCAGCTGCTTCCTATCCATATCCATATAATTCTTCAAATTTATTCAACCATCCCTATCCTCCACCACCACCTGCATCCTCTGCCTCTCATTCAGGTCCCTTAGACTATGCTTCTTCAGTTCATTTAGACTATCCCAGGCCTCCACTATCTCATTCTGGCTCATCAGACTATGTCATGCCTCCACTGACTCATTCTGGTTCTAGTGTTTATCCCAACCTATACCCTGCTCCTCCTCCTCCTCCTCCTCCAGTGACACACACTGGTCTTCTGTTCGGTGTCCAGCACCAAAGCAGTTTTCAGTATGGATTGCCTCATCAACATTATCAACAATCTGCCCTATATCCACCTCCCGAAGGCCAAAACCCGGCCCCTTCGCATGTAAATAGTTTCGCAGGTGACTACAGGCAGGATAATGTAAGCTATGGGGCAATGGGATTGTCCCAAAAAATTGACAACTCTGTTTCTTCTCATCCTTACGGCTGTCCGACTTTGGATGTTTCTATGAGCAATCTTCATTTGTCGGATAGCAATCAAACTGCTCCTGCATCGCCTCCTGCACCATCGTTGATGCCTTCTCAAAGTGAAAGGTTCTATGGATACCCAAATAACTATATTGCAAGTTCGGACCCTGGGAACCTTGTTCGACCTAATCCTTCTGCTCTTGCCTATACTGGTTCATTTGATGCATCAAACCATGGTCAGAGCATGCAAATTGTGCCATTGCAGGGAAAAGGGTCCTTGAAAGTTCTGCTCTTACATGGGAATTTAGATATATGGGTTCATGAAGCAAAAAACCTTCCAAATATGGACATGTTTCATAAAACATTGGGTGATGTATTCTCCGCGCAACCGGGAGATGTAAGTAACAAGATCGAAGGACAAATGTCTAAGAAAATTACTAGTGATCCTTATGTGACGGTTTCAGTGGCAAAGGCTGTAGTTGCGAGGACGTATGTCATCAGCAATTCTGAAAATCCTGTTTGGAAGCAACACTTCCATGTTCCTGTAGCACATAATACTGCTGAAGTGCACTTTGTGGTTAAGGACAGTGATGTTGTGGGCTCACAACTCATTGGAATTGTGGCAATTCCAGTTGAGCAAATATTCGCAGGTATCAAAGTCGAAGGAACTTTTCCTATACTAAATAATAGTAGGAAGCCTTGCAAACCTGGTGCTGTTTTGAGTGTTTCTATTCAGTACATCCCAATTGAGAAACTGAGCATTTATCATCAAGGGGTGGGAGCTGGACCTTACTACGAAGGGGTGCCTGGGACATATTTCCCACTCAGGAAAGGTGGAACAGTAACTTTGTACCAAGATGCCCATGTCCCTGACGGGCTTCTCCCAAACATTCAGCTTGATGATGGGATGCATTATGTACATGGTAAATGTTGGCATGACATATTTGATGCAATACGACAGGCACGGCGTTTGATTTATATCACAGGCTGGTCAGTGTGGCACAAAGTTATGCTGGTTCGTGATGCCAGGTCTCCATTGTCACCAGAGAGCACTTTGGGCAATATCCTGAGAGCAAAATCTCAGGAAGGAGTCAGGGTTCTTCTTCTTATTTGGGATGACCCCACTTCAAGGAACATACTAGGTTACAAAACAGATGGAATTATGGCAACTCATGATGAGGAAACTCGCCGCTTCTTTAAACATTCTTCTGTGGAAGTGATCCTTTGTCCCCGTATTGCTGGAAAGCGAAATAGCTGGGCCAGGCAAAGGGAAGTAGAAACAATCTATACTCACCATCAGAAAACTGTAATTGTCGATGATGATGCTGGGAGTAATAAAAGGAAAATTATAGCTTTTGTTGGAGGTCTCGACTTATGTGATGGGCGATATGATACTCCAGCGCATCCTATTTTCCGTAGTCTCCAAACAGTGCATAAGGATGATTATCACAATCCAACCTACACAGGTAACACTGGTCCACGGGAACCATGGCATGACTTGCACTCCAAAATTGATGGTCCTGCTGCATATGATGTTCTGACAAACTTTGAGGATAGGTGGTTGAAAGCAGCAAAACCGCGTGGAATTAAAAAATTAAAACATTCATATGATGATACTTTGCTCAGAATAGAAAGGATTCCAGACATATTAGGGGTGAATGATGCTCCAACCATCAGTGAAAACAATCCTGAAGCGTGGCATGTTCAGATCTTCCGGTCAATCGACTCAAATTCTGTCAAGGGCTTTCCAAAGGATCCAAAAGATGCCACAAGCAAGAATCTAGTGTGTGGAAAAAATGTGCTGATAGACATGAGCATACATACAGCGTATGTGAAGGCTATTCGTGCTGCCCAACACTTCATATATATTGAGAACCAATATTTCATTGGGTCATCTTACAATTGGACTCAAAATAAAGACCTAGGTGCCAATAATTTGATTCCCATGGAGATCGCACTGAAGATTGCTGAAAAGATTAGAGCAAACGAGAGATTCGCTGTGTATATTGTTATTCCTATGTGGCCAGAGGGAAATCCAACTGGGGCTGCTACTCAAAGGATTCTATATTGGCAGCATAAAACTATGCAAATGATGTACGAGACAATATATGAAGCTTTAGTTGAGGTTGGGCTTGAATCAGCTTACACACCGCAAGATTATTTGAATTTCTTCTGCCTTGGCAATCGTGAGGCTACAGATGTGCATCAAAATACAACGCCACTAAACACTGGTGCACCAAATACCCCCCAAGCACTTGGCCAAAAAAGCCGTCGTTTTATGATATACGTTCATTCAAAAGGCATGATTGTTGATGATGAATATGTCATATTGGGGTCTGCAAACATCAACCAGCGCTCCATGGAAGGCACAAGAGATACTGAAATTGCAATGGGTGCTTATCAACCGAATCATACTTGGGCGAGAAGAATACGCAGTCCACTTGGACAGATTTTCGGATATAGGATGTCACTTTGGGCAGAACACATGGGGACAATTGAAGATTGCTTCACACAACCTGAGAGTCTGGAATGCGTAAGAAGAGTTAGAACAATGGGAGAGCTGAATTGGAAACAGTTTTCTGCTGATGAAGTAACAGAGATGAGAGGACATTTACAGAAGTACCCTGTTGAAATTGATCGGAAAGGGAAGGTGAAACCGATTCCTGGACAAGAAAACTTCCCTGATGTAGGTGGAAGCATAGTTGGTTCCTTCCTTGGCATTCAGGAGAACCTGACCATATGA 3312 0.4348 MDHNGSSSSYPPHQNPYAYPPPHPSAYPPSSQPPYPPAASYPYPYNSSNLFNHPYPPPPPASSASHSGPLDYASSVHLDYPRPPLSHSGSSDYVMPPLTHSGSSVYPNLYPAPPPPPPPVTHTGLLFGVQHQSSFQYGLPHQHYQQSALYPPPEGQNPAPSHVNSFAGDYRQDNVSYGAMGLSQKIDNSVSSHPYGCPTLDVSMSNLHLSDSNQTAPASPPAPSLMPSQSERFYGYPNNYIASSDPGNLVRPNPSALAYTGSFDASNHGQSMQIVPLQGKGSLKVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDVFSAQPGDVSNKIEGQMSKKITSDPYVTVSVAKAVVARTYVISNSENPVWKQHFHVPVAHNTAEVHFVVKDSDVVGSQLIGIVAIPVEQIFAGIKVEGTFPILNNSRKPCKPGAVLSVSIQYIPIEKLSIYHQGVGAGPYYEGVPGTYFPLRKGGTVTLYQDAHVPDGLLPNIQLDDGMHYVHGKCWHDIFDAIRQARRLIYITGWSVWHKVMLVRDARSPLSPESTLGNILRAKSQEGVRVLLLIWDDPTSRNILGYKTDGIMATHDEETRRFFKHSSVEVILCPRIAGKRNSWARQREVETIYTHHQKTVIVDDDAGSNKRKIIAFVGGLDLCDGRYDTPAHPIFRSLQTVHKDDYHNPTYTGNTGPREPWHDLHSKIDGPAAYDVLTNFEDRWLKAAKPRGIKKLKHSYDDTLLRIERIPDILGVNDAPTISENNPEAWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSYNWTQNKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGNPTGAATQRILYWQHKTMQMMYETIYEALVEVGLESAYTPQDYLNFFCLGNREATDVHQNTTPLNTGAPNTPQALGQKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPNHTWARRIRSPLGQIFGYRMSLWAEHMGTIEDCFTQPESLECVRRVRTMGELNWKQFSADEVTEMRGHLQKYPVEIDRKGKVKPIPGQENFPDVGGSIVGSFLGIQENLTI* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01004 1103 Gene3D Endonuclease Chain A 493 730 - -
Pte7g01004 1103 Gene3D C2 domain 285 423 IPR035892 -
Pte7g01004 1103 MobiDBLite consensus disorder prediction 1 39 - -
Pte7g01004 1103 Pfam C2 domain 290 416 IPR000008 -
Pte7g01004 1103 Pfam Phospholipase D Active site motif 950 976 IPR001736 GO:0003824
Pte7g01004 1103 Pfam Phospholipase D Active site motif 618 652 IPR001736 GO:0003824
Pte7g01004 1103 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 283 439 IPR035892 -
Pte7g01004 1103 SMART C2_3c 291 413 IPR000008 -
Pte7g01004 1103 SMART pld_4 949 976 IPR001736 GO:0003824
Pte7g01004 1103 SMART pld_4 617 652 IPR001736 GO:0003824
Pte7g01004 1103 PANTHER PHOSPHOLIPASE D 282 1094 IPR015679 -
Pte7g01004 1103 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 617 652 IPR001736 GO:0003824
Pte7g01004 1103 MobiDBLite consensus disorder prediction 52 92 - -
Pte7g01004 1103 Gene3D Endonuclease Chain A 762 999 - -
Pte7g01004 1103 FunFam Phospholipase D 763 995 - -
Pte7g01004 1103 SUPERFAMILY Phospholipase D/nuclease 458 715 - -
Pte7g01004 1103 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 949 976 IPR001736 GO:0003824
Pte7g01004 1103 ProSiteProfiles C2 domain profile. 269 414 IPR000008 -
Pte7g01004 1103 FunFam Phospholipase D delta 285 432 - -
Pte7g01004 1103 FunFam Phospholipase D delta 491 729 - -
Pte7g01004 1103 MobiDBLite consensus disorder prediction 14 39 - -
Pte7g01004 1103 Pfam Phospholipase D C terminal 1023 1093 IPR024632 -
Pte7g01004 1103 MobiDBLite consensus disorder prediction 146 169 - -
Pte7g01004 1103 CDD C2_plant_PLD 284 437 - -
Pte7g01004 1103 MobiDBLite consensus disorder prediction 209 229 - -
Pte7g01004 1103 SUPERFAMILY Phospholipase D/nuclease 774 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01004 Pte-Chr7 34731390 34739571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01004 62 1104 Phospholipase D Gene Family (Wang group) AT2G42010 69.174 0.0 1471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01004 K01115 - qsa:O6P43_017532 1597.79