Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00990 ATGGCTTGTTCGTCAACAACGGGAGCTCCTTCGCAGGAAAAACGGCACCGTTCTATCTTCGATCTGCCTCCCAATTTCTTCGACTTGTGTCATCTCCTTCCTCCTCCTAGCTTCTCCAGTTCGAGCCACCAGCACCGTTCTACCTATTCAAACCATGAAGCTGTACTCCCAATTGTTAAGGACGACAATTATGAGCCGCGAAACACTGACGTTTCAATAACCAGATGGACCTGCAATACCTGCAAAGCTGAGTTCGATTCCCTTCAAGACCAACGTTCACATTTCAAATCCGATATTCATCGATTCAATGTGAAGCTGACAATTGCTGGAAAAAATATTGTGAAAGAGGATGATTTTGATGATTTGACATCAGATTCTTTTAAAGACTACGATGTATCTAGTATATCAGGATCGGAAGATGAGGATGAGAATGGAAGCCGTGTTTCCAATGATTTACGCGGTGGATCTAATGAAAATTTGAAGAAGAAGTTACTTATTTCTCTTCCCACAGGGGAGAGAGTTTCAGTTTGGAAGTGTTTGGTTATGAATGAATGGGAAACTATTTATTACGATGATATTGAAGAAACTGGAAATGGTAGACTCAAGCCATGCATGGGAGCACATGAAGTGATCAAGAAGTTGAAATCATTGGTGAATGAGCCCAGGGATCAAACCCGTTTGAGGATTGTGCTTCTAGCAACTGGTGGACACTTTGCTGGTTGCGTGTTCGATGGTGATGTTGTTGTGGCTCACAAGACATTCCATAGATATGTTGTAAGAGCCAAGTCAGGTAAAAAGCAGTCTTCAAAAGATGCTACCGGTAGGGCTGCACATTCAGCTGGTGCTTCACTTCGTCGTTATAATGAACTTGCATTGAAGAAGGAAATTCAAGAATTGCTTGCTGCTTGGAAGCCATACTTTGATGCTTCCACTTGTATTTTTACTTATTCTCCTTCAAATAACCGTCAACTGCTTTTTAATGGGGAAAAACCAAACTTTAGCCATCATCACTGTACAATTAGCAACATTCCTTTAACCATTCGACGACCTACATTGAAGGAAGCAAAGCGTGTTTATGGTCAGTTAACTCAAGTTATAAATGAAGTAGTTGAGGATGAAAATTCACTACACGTCAACCAGAATGTGCTCTTCAGCCATAATGTTGAGGGAAGTGATAACCTAAGCTCCACCGATAGAAATGTGGATGGCTTGGATTACAAAGACAGAACTGAAGTGTGTTCAGGTTATGGAGAACCTGATGACAAACCTCCTACACCAAGTAATAGTGGAACTGAAAATCAATCCATTTTTGAGTTAACACCTTTACACAAAGCAGCTCAATCAGGTGATGTGAATAAGATCCTGGAACTCCTGGAACTAGGCCAGGATCCTTGTGTGAAAGATGAAAGGGGGCGAACGCCATACATGCTAGCAAGTGAGAAAGAAGTCAGAAATGCTTTCAGGAGGTTTATGGCATCCAATCTTGATAAATGGGATTGGCATGCTGCTAAAGTTCCTTGTCCATTGACAAAGGAAATGGAAGAATCCCAGGCTGCTAAGCAGGCAGAAAAAGATGCTAAAAGAAAAGCTAGAGCAAAAGAATTGAAGAAATTGCGGAAAGCAAAAGAAAAAGAAAAGAAGGCTCAGGCTCAAGTTGCTGTTCCCCAGACTACTTCAGTTGCCGGAAATCAATTAGTTACTCCAGCTTCTATTCTGAAGGGTCGATCTCAACCTAATAGCAGTTCTCGGTTATCTAATGAGGAGGAACTAAGTAAAACACAAGCAGCAGAGAGGGAAAAAAGAGCTGCCGCCGCTGAGAGGAGACTAGCTGCAGCTACAATGCTTCAGGCTCAAGAGAATGTTGCCAGTGTCTCCTCAAGCAGTTCACAACCCAAAAGCGGTGTGGCTGGTGATGTCAGCTGTTCATGCTGTAATTCATCACTGGCTGGTAAAATTCCTTTTCACAGGTATAACTACAAATATTGCAGCACATCCTGTATGCACGTGCATAGGGAGATTCTTGAGGATGAATAA 2034 0.4218 MACSSTTGAPSQEKRHRSIFDLPPNFFDLCHLLPPPSFSSSSHQHRSTYSNHEAVLPIVKDDNYEPRNTDVSITRWTCNTCKAEFDSLQDQRSHFKSDIHRFNVKLTIAGKNIVKEDDFDDLTSDSFKDYDVSSISGSEDEDENGSRVSNDLRGGSNENLKKKLLISLPTGERVSVWKCLVMNEWETIYYDDIEETGNGRLKPCMGAHEVIKKLKSLVNEPRDQTRLRIVLLATGGHFAGCVFDGDVVVAHKTFHRYVVRAKSGKKQSSKDATGRAAHSAGASLRRYNELALKKEIQELLAAWKPYFDASTCIFTYSPSNNRQLLFNGEKPNFSHHHCTISNIPLTIRRPTLKEAKRVYGQLTQVINEVVEDENSLHVNQNVLFSHNVEGSDNLSSTDRNVDGLDYKDRTEVCSGYGEPDDKPPTPSNSGTENQSIFELTPLHKAAQSGDVNKILELLELGQDPCVKDERGRTPYMLASEKEVRNAFRRFMASNLDKWDWHAAKVPCPLTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKEKKAQAQVAVPQTTSVAGNQLVTPASILKGRSQPNSSSRLSNEEELSKTQAAEREKRAAAAERRLAAATMLQAQENVASVSSSSSQPKSGVAGDVSCSCCNSSLAGKIPFHRYNYKYCSTSCMHVHREILEDE* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00990 677 MobiDBLite consensus disorder prediction 410 433 - -
Pte7g00990 677 ProSiteProfiles Ankyrin repeat profile. 437 469 IPR002110 GO:0005515
Pte7g00990 677 ProSitePatterns Zinc finger C2H2 type domain signature. 78 100 IPR013087 -
Pte7g00990 677 SUPERFAMILY beta-beta-alpha zinc fingers 56 107 IPR036236 -
Pte7g00990 677 MobiDBLite consensus disorder prediction 569 589 - -
Pte7g00990 677 Pfam Bacteroidetes VLRF1 release factor 229 365 IPR041175 -
Pte7g00990 677 SUPERFAMILY Ankyrin repeat 434 493 IPR036770 -
Pte7g00990 677 MobiDBLite consensus disorder prediction 133 154 - -
Pte7g00990 677 MobiDBLite consensus disorder prediction 569 607 - -
Pte7g00990 677 MobiDBLite consensus disorder prediction 590 606 - -
Pte7g00990 677 Gene3D - 425 543 IPR036770 -
Pte7g00990 677 Coils Coil 586 606 - -
Pte7g00990 677 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 11 676 IPR047139 -
Pte7g00990 677 MobiDBLite consensus disorder prediction 537 556 - -
Pte7g00990 677 Coils Coil 513 551 - -
Pte7g00990 677 Pfam Vms1-associating treble clef domain 640 672 IPR041540 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00990 14 542 C2H2 Transcription Factor Family AT1G01930 54.291 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00990 K26089 - qsa:O6P43_027113 740.339